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一个无内含子的小鼠S-腺苷甲硫氨酸脱羧酶基因的克隆与测序,该基因编码一种在肝脏中强烈表达的功能性酶。

Cloning and sequencing of an intronless mouse S-adenosylmethionine decarboxylase gene coding for a functional enzyme strongly expressed in the liver.

作者信息

Persson K, Holm I, Heby O

机构信息

Department of Cellular and Developmental Biology, University of Umeå, Sweden.

出版信息

J Biol Chem. 1995 Mar 10;270(10):5642-8. doi: 10.1074/jbc.270.10.5642.

Abstract

A genomic clone for a mouse S-adenosylmethionine decarboxylase (AdoMetDC) gene was isolated from a cosmid library. Surprisingly, the gene proved to be intronless. With the exception of three base substitutions (changing 2 amino acids in the deduced protein), the 1002-nucleotide sequence of the open reading frame was identical to that of mouse AdoMetDC cDNA. Moreover, the gene contained a poly(dA) tract at the 3' end and was flanked by 13-base pair direct repeats. Our findings suggest that this gene has arisen by retroposition, in which a fully processed AdoMetDC mRNA has been reverse transcribed into a DNA copy and inserted into the genome. By polymerase chain reaction, we positively identified the intronless gene in the mouse genome, and, by primer extension analysis, we proved the gene to be functional. Thus, its transcripts were found in many cell lines and tissues of the mouse and were particularly abundant in the liver. When the open reading frame of the intronless gene was expressed in Escherichia coli HT551, a strain with no AdoMetDC activity, it was found to encode a 38-kDa protein, corresponding to AdoMetDC proenzyme. Although the change of methionine 70 to isoleucine was close to the cleavage site at serine 68, this protein underwent proenzyme processing, generating a 31-kDa alpha subunit and an 8-kDa beta subunit. Importantly, the protein encoded by the intronless gene was functional, i.e. it catalyzed the decarboxylation of S-adenosylmethionine, and its specific activity was comparable with that of recombinant human AdoMetDC purified according to the same procedure.

摘要

从小鼠黏粒文库中分离出一个小鼠S-腺苷甲硫氨酸脱羧酶(AdoMetDC)基因的基因组克隆。令人惊讶的是,该基因被证明没有内含子。除了三个碱基替换(导致推导蛋白中的两个氨基酸发生变化)外,开放阅读框的1002个核苷酸序列与小鼠AdoMetDC cDNA的序列相同。此外,该基因在3'端含有一个聚(dA)序列,两侧是13个碱基对的直接重复序列。我们的研究结果表明,这个基因是通过反转录转座产生的,即一个完全加工好的AdoMetDC mRNA被反转录成DNA拷贝并插入到基因组中。通过聚合酶链反应,我们在小鼠基因组中明确鉴定出了这个无内含子基因,并且通过引物延伸分析,证明该基因具有功能。因此,在小鼠的许多细胞系和组织中都发现了它的转录本,并且在肝脏中特别丰富。当无内含子基因的开放阅读框在没有AdoMetDC活性的大肠杆菌HT551菌株中表达时,发现它编码一种38 kDa的蛋白质,对应于AdoMetDC酶原。尽管甲硫氨酸70变为异亮氨酸的变化靠近丝氨酸68处的切割位点,但这种蛋白质经历了酶原加工,产生了一个31 kDa的α亚基和一个8 kDa的β亚基。重要的是,无内含子基因编码的蛋白质具有功能,即它催化S-腺苷甲硫氨酸的脱羧反应,其比活性与按照相同程序纯化的重组人AdoMetDC相当。

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