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一种来自旋盘尾丝虫的新型反式剪接mRNA编码一种功能性S-腺苷甲硫氨酸脱羧酶。

A novel trans-spliced mRNA from Onchocerca volvulus encodes a functional S-adenosylmethionine decarboxylase.

作者信息

Da'Dara A A, Henkle-Dührsen K, Walter R D

机构信息

Bernhard Nocht Institute for Tropical medicine, Department of Biochemistry, Hamburg, Germany.

出版信息

Biochem J. 1996 Dec 1;320 ( Pt 2)(Pt 2):519-30. doi: 10.1042/bj3200519.

Abstract

Complete cDNA and genomic sequences encoding the Onchocerca volvulus S-adenosylmethionine decarboxylase (SAMDC), a key enzyme in polyamine biosynthesis, have been isolated and characterized. The deduced amino acid sequence encodes a 42 kDa proenzyme with a moderate level of sequence homology to eukaryotic SAMDCs. Enzymically active O. volvulus SAMDC was expressed at a high level in an Escherichia coli mutant strain lacking endogenous SAMDC. The recombinant enzyme was purified to homogeneity using DEAE-cellulose, methylglyoxal bis(guanylhydrazone)-Sepharose and Superdex S-200 chromatography. It was determined that the recombinant proenzyme is cleaved to produce 32 and 10 kDa subunits. The sequence of the N-terminal portion of the large subunit was determined and comparison with the sequence of the proenzyme revealed that the precise cleavage site lies between Glu86 and Ser87. Gel-filtration experiments demonstrated that these two subunits combine to form an active heterotetramer. Comparison of the cDNA and genomic sequences revealed that the SAMDC mRNA undergoes both cis- and trans-splicing in its 5'-untranslated region (UTR). Anchored PCR on O. volvulus mRNA confirmed the cDNA sequence and identified two distinct trans-spliced products, a 22-nucleotide spliced-leader sequence and a 138 bp sequence containing the 22 nucleotide spliced-leader sequence. Genomic Southern-blot analysis suggests that the O. volvulus SAMDC is encoded by a single-copy gene. This gene spans 5.3 kb and is comprised of nine exons and eight introns. The first intron is located in the 5'-UTR and processing of this intron has a potential regulatory function. The 5'-flanking region of the gene contains potential transcriptional regulatory elements such as a TATA box, two CAAT boxes and AP-1-, C/EBP-, ELP-, H-APF-1-, HNF-5- and PEA3-binding sites.

摘要

已分离并鉴定了编码盘尾丝虫S-腺苷甲硫氨酸脱羧酶(SAMDC)的完整cDNA和基因组序列,该酶是多胺生物合成中的关键酶。推导的氨基酸序列编码一种42 kDa的酶原,与真核生物SAMDCs具有中等程度的序列同源性。具有酶活性的盘尾丝虫SAMDC在缺乏内源性SAMDC的大肠杆菌突变菌株中高水平表达。使用DEAE-纤维素、甲基乙二醛双(胍腙)-琼脂糖凝胶和Superdex S-200色谱法将重组酶纯化至同质。确定重组酶原被切割产生32 kDa和10 kDa的亚基。测定了大亚基N端部分的序列,与酶原序列比较显示精确的切割位点位于Glu86和Ser87之间。凝胶过滤实验表明这两个亚基结合形成活性异源四聚体。cDNA和基因组序列的比较显示,SAMDC mRNA在其5'-非翻译区(UTR)经历顺式和反式剪接。对盘尾丝虫mRNA进行的锚定PCR证实了cDNA序列,并鉴定出两种不同的反式剪接产物,一种22个核苷酸的剪接前导序列和一个包含22个核苷酸剪接前导序列的138 bp序列。基因组Southern印迹分析表明盘尾丝虫SAMDC由单拷贝基因编码。该基因跨度为5.3 kb,由九个外显子和八个内含子组成。第一个内含子位于5'-UTR中,该内含子的加工具有潜在的调节功能。该基因的5'-侧翼区域包含潜在的转录调节元件,如TATA框、两个CAAT框以及AP-1、C/EBP、ELP、H-APF-1、HNF-5和PEA3结合位点。

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