Zanotti G, Marcello M, Malpeli G, Folli C, Sartori G, Berni R
Department of Organic Chemistry, University of Padova, Italy.
J Biol Chem. 1994 Nov 25;269(47):29613-20.
The three-dimensional structures of complexes between bovine plasma retinol-binding protein (RBP) and three retinol analogs with different end groups (fenretinide, all-trans retinoic acid, and axerophthene) have been determined to 1.8-1.9-A resolution. Their models are very similar to that of the bovine retinol.RBP complex: the root mean square deviations between equivalent alpha-carbons in the two proteins range from 0.17 to 0.24 A. The retinoid molecules fit in the beta-barrel cavity assuming the same conformation of the vitamin, and the substitutions have no consequences on the overall protein structure. While confirming that an intact hydroxyl end group is not an absolute requirement for a correct retinoid binding to RBP, this study has shown the occurrence of conformational changes, although limited, in the rather flexible loop region at the entrance of the beta-barrel upon fenretinide and retinoic acid binding. These changes are suitable for accommodating the end groups of the above retinoids. Instead, no such changes have been revealed in RBP complexed with axerophthene, a retinol analog bearing a hydrogen atom in place of the hydroxyl end group. The protein conformational changes in the above loop region, the steric hindrance of bulky end groups of bound retinoids, and the lack of the retinol hydroxyl group appear to be responsible for the possible reduced affinity of retinoids for RBP relative to retinol and, at the same time, for the abolished or reduced affinity of retinoid.RBP complexes for transthyretin relative to retinol-RBP.
已确定牛血浆视黄醇结合蛋白(RBP)与三种具有不同末端基团的视黄醇类似物(芬维A胺、全反式维甲酸和视黄醛)形成的复合物的三维结构,分辨率达到1.8 - 1.9埃。它们的模型与牛视黄醇 - RBP复合物的模型非常相似:两种蛋白质中等效α - 碳原子之间的均方根偏差在0.17至0.24埃范围内。类视黄醇分子以维生素的相同构象适配于β - 桶状腔内,并且这些取代对整体蛋白质结构没有影响。虽然证实完整的羟基末端基团并非类视黄醇与RBP正确结合的绝对必要条件,但这项研究表明,在芬维A胺和维甲酸结合后,β - 桶状腔入口处相当灵活的环区域会发生构象变化,尽管变化有限。这些变化适合容纳上述类视黄醇的末端基团。相反,在与视黄醛(一种用氢原子取代羟基末端基团的视黄醇类似物)复合的RBP中未发现此类变化。上述环区域的蛋白质构象变化、结合的类视黄醇大体积末端基团的空间位阻以及视黄醇羟基基团的缺失,似乎是类视黄醇相对于视黄醇对RBP亲和力可能降低的原因,同时也是类视黄醇 - RBP复合物相对于视黄醇 - RBP对转甲状腺素蛋白亲和力丧失或降低的原因。