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类前头部噬菌体T4多头部的体外成熟:伴随蛋白水解切割和晶格扩展的结构变化

In vitro maturation of prehead-like bacteriophage T4 polyheads: structural changes accompanying proteolytic cleavage and lattice expansion.

作者信息

Müller M, Mesyanzhinov V V, Aebi U

机构信息

M. E. Müller Institute for Microscopy, University of Basel, Switzerland.

出版信息

J Struct Biol. 1994 May-Jun;112(3):199-215. doi: 10.1006/jsbi.1994.1021.

DOI:10.1006/jsbi.1994.1021
PMID:7986647
Abstract

We have studied cleavage and expansion of the major T4 phage capsid protein gp23 (56 kDa) using polyheads, an aberrant, polymorphic tubular variant of bacteriophage T4D, as a model system. In a first step, we have cleaved the 65-amino-acid-long amino-terminal "delta piece" by limited proteolysis with Staphylococcus aureus V8 protease (type XVII) at exactly the same position, i.e., between residues 65 and 66, at which the phage-coded T4Ppase cleaves, to yield mature gp23* (48.7 kDa) without significantly affecting a second potential cleavage site between amino acids 142 and 143. Negatively stained preparations of thus cleaved polyheads revealed a near-hexagonal lattice with a 11.2-nm lattice constant. One-sided correlation averages of these cleaved/unexpanded polyheads yielded capsomeres that were rounder than those of prehead-like (i.e., uncleaved) control polyheads, with distinct trimers of mass (specifically, trimers of delta pieces in the area where three protomers are shared among three different capsomeres) removed, as revealed by difference maps computed from the correlation averages. Quantitative expansion of the 11.2-nm near-hexagonal lattice into the 13-nm near-hexagonal lattice characteristic of mature phage heads could be induced by pelleting the cleaved/unexpanded polyheads and resuspending them in water. This expansion step was inhibited by the presence of 100 mM phosphate. Cleavage of prehead-like polyheads to the 41-kDa gp23+ either between residues 142 and 143 by V8 protease or between residues 143 and 144 by trypsin rendered the polyheads unable to expand. In contrast, cleaved/expanded gp23* polyheads became resistant to cleavage to gp23+. As revealed by difference maps, the 7.3-kDa mass was additionally missing at the corners where the delta-piece trimers contact the protomers.

摘要

我们使用多面体(噬菌体T4D的一种异常的、多态的管状变体)作为模型系统,研究了主要的T4噬菌体衣壳蛋白gp23(56 kDa)的切割和扩展。第一步,我们用金黄色葡萄球菌V8蛋白酶(XVII型)通过有限蛋白酶解作用,在与噬菌体编码的T4Ppase切割位点完全相同的位置,即65和66位氨基酸之间,切割65个氨基酸长的氨基末端“δ片段”,以产生成熟的gp23*(48.7 kDa),而不会显著影响142和143位氨基酸之间的第二个潜在切割位点。对如此切割的多面体进行负染制备,显示出具有11.2纳米晶格常数的近六边形晶格。这些切割/未扩展的多面体的单边相关平均值产生的衣壳粒比类似前头部(即未切割)的对照多面体的衣壳粒更圆,通过从相关平均值计算出的差异图可以看出,在三个不同衣壳粒共享三个原体的区域中,质量明显的三聚体(具体来说是δ片段的三聚体)被去除。通过将切割/未扩展的多面体沉淀并重新悬浮在水中,可以诱导11.2纳米的近六边形晶格定量扩展为成熟噬菌体头部特有的13纳米近六边形晶格。这一扩展步骤受到100 mM磷酸盐的抑制。用V8蛋白酶在142和143位氨基酸之间或用胰蛋白酶在143和144位氨基酸之间将类似前头部的多面体切割为41 kDa的gp23+,会使多面体无法扩展。相反,切割/扩展的gp23*多面体对切割为gp23+具有抗性。通过差异图可以看出,在δ片段三聚体与原体接触的角上,还额外缺失了7.3 kDa的质量。

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