• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用电子显微镜和原子力显微镜观察Fur阻遏蛋白与含操纵基因的DNA的结合及聚合情况。

Observation of binding and polymerization of Fur repressor onto operator-containing DNA with electron and atomic force microscopes.

作者信息

Le Cam E, Frechon D, Barray M, Fourcade A, Delain E

机构信息

Laboratoire de Microscopie Cellulaire et Moléculaire, Centre National de la Recherche Scientifique, Villejuif, France.

出版信息

Proc Natl Acad Sci U S A. 1994 Dec 6;91(25):11816-20. doi: 10.1073/pnas.91.25.11816.

DOI:10.1073/pnas.91.25.11816
PMID:7991541
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC45326/
Abstract

The Fur (ferric uptake regulation) protein is a global regulator that, in the presence of Fe2+, represses the expression of a number of iron-acquisition genes and virulence determinants such as toxins. Dark-field electron microscopy of positively stained Fur-DNA complexes in addition to atomic force microscopy allowed direct visualization of Fur interactions with the regulatory regions of aerobactin and hemolysin operons and provided complementary information about the structure of the complexes. According to the DNA used and the protein/DNA ratio, Fur binding to DNA results in partial or total covering of the fragments, indicating that the protein initiates polymerization along the DNA molecules at specific sites. Negative staining of Fur-DNA complexes revealed a well-ordered structure of the polymer suggesting a helical arrangement. Local rigidification of the DNA molecules resulting from Fur binding could be involved in the repression process.

摘要

铁摄取调节(Fur)蛋白是一种全局调节因子,在Fe2+存在的情况下,它会抑制许多铁获取基因和毒力决定因素(如毒素)的表达。除了原子力显微镜外,对阳性染色的Fur-DNA复合物进行暗场电子显微镜观察,可以直接观察到Fur与气杆菌素和溶血素操纵子调控区域的相互作用,并提供有关复合物结构的补充信息。根据所用的DNA和蛋白质/DNA比例,Fur与DNA的结合会导致片段的部分或完全覆盖,这表明该蛋白质在特定位点沿着DNA分子起始聚合。Fur-DNA复合物的负染色显示聚合物具有有序的结构,表明呈螺旋排列。Fur结合导致的DNA分子局部刚性化可能参与了抑制过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/63aaf9dc8eb1/pnas01147-0060-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/56769e287c53/pnas01147-0058-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/1f9f83157dfa/pnas01147-0059-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/d8d07ac1669e/pnas01147-0060-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/63aaf9dc8eb1/pnas01147-0060-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/56769e287c53/pnas01147-0058-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/1f9f83157dfa/pnas01147-0059-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/d8d07ac1669e/pnas01147-0060-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a3b/45326/63aaf9dc8eb1/pnas01147-0060-b.jpg

相似文献

1
Observation of binding and polymerization of Fur repressor onto operator-containing DNA with electron and atomic force microscopes.利用电子显微镜和原子力显微镜观察Fur阻遏蛋白与含操纵基因的DNA的结合及聚合情况。
Proc Natl Acad Sci U S A. 1994 Dec 6;91(25):11816-20. doi: 10.1073/pnas.91.25.11816.
2
Visualization of trp repressor and its complexes with DNA by atomic force microscopy.通过原子力显微镜观察色氨酸阻遏物及其与DNA的复合物。
Biophys J. 1998 Dec;75(6):2712-20. doi: 10.1016/S0006-3495(98)77715-X.
3
Fur (ferric uptake regulation) protein interaction with target DNA: comparison of gel retardation, footprinting and electron microscopy analyses.Fur(铁摄取调节)蛋白与靶DNA的相互作用:凝胶阻滞、足迹法和电子显微镜分析的比较
Biochem Biophys Res Commun. 1994 May 30;201(1):346-55. doi: 10.1006/bbrc.1994.1708.
4
Metal-responsive promoter DNA compaction by the ferric uptake regulator.铁摄取调节蛋白诱导的金属反应启动子 DNA 紧缩
Nat Commun. 2016 Aug 25;7:12593. doi: 10.1038/ncomms12593.
5
Binding of the fur (ferric uptake regulator) repressor of Escherichia coli to arrays of the GATAAT sequence.大肠杆菌的铁摄取调节因子(fur)阻遏物与GATAAT序列阵列的结合。
J Mol Biol. 1998 Oct 30;283(3):537-47. doi: 10.1006/jmbi.1998.2119.
6
Gene repression by the ferric uptake regulator in Pseudomonas aeruginosa: cycle selection of iron-regulated genes.铜绿假单胞菌中铁摄取调节因子介导的基因抑制:铁调节基因的循环选择
Proc Natl Acad Sci U S A. 1996 Apr 30;93(9):4409-14. doi: 10.1073/pnas.93.9.4409.
7
Isolation and identification of Fur binding genes in Escherichia coli.大肠杆菌中Fur结合基因的分离与鉴定
Mol Cells. 1999 Oct 31;9(5):517-25.
8
Characterization of the DNA-binding site in the ferric uptake regulator protein from Escherichia coli by UV crosslinking and mass spectrometry.通过紫外线交联和质谱法对大肠杆菌铁摄取调节蛋白中DNA结合位点的表征
FEBS Lett. 2005 Oct 24;579(25):5454-60. doi: 10.1016/j.febslet.2005.08.067. Epub 2005 Sep 23.
9
Characterization of the Neisseria gonorrhoeae Iron and Fur Regulatory Network.淋病奈瑟菌铁及铁摄取调节蛋白(Fur)调控网络的特性分析
J Bacteriol. 2016 Jul 28;198(16):2180-91. doi: 10.1128/JB.00166-16. Print 2016 Aug 15.
10
The transcriptional repressor TtgV recognizes a complex operator as a tetramer and induces convex DNA bending.转录阻遏物TtgV以四聚体形式识别一个复杂的操纵基因,并诱导DNA发生凸形弯曲。
J Mol Biol. 2007 Jun 15;369(4):927-39. doi: 10.1016/j.jmb.2007.04.022. Epub 2007 Apr 14.

引用本文的文献

1
Meddling with Metal Sensors: Fur-Family Proteins as Signaling Hubs.干预金属传感器:毛皮家族蛋白作为信号枢纽。
J Bacteriol. 2023 Apr 25;205(4):e0002223. doi: 10.1128/jb.00022-23. Epub 2023 Apr 3.
2
Method combining BAC film and positive staining for the characterization of DNA intermediates by dark-field electron microscopy.结合BAC膜和正染色通过暗场电子显微镜表征DNA中间体的方法。
Biol Methods Protoc. 2020 Jul 7;5(1):bpaa012. doi: 10.1093/biomethods/bpaa012. eCollection 2020.
3
The Ferric uptake regulator (Fur) and iron availability control the production and maturation of the antibacterial peptide microcin E492.

本文引用的文献

1
Homologous recombination: a universal recombination filament.同源重组:一种通用的重组细丝。
Curr Biol. 1993 Jun 1;3(6):358-60. doi: 10.1016/0960-9822(93)90200-8.
2
Evidence of DNA bending in transcription complexes imaged by scanning force microscopy.通过扫描力显微镜成像的转录复合物中DNA弯曲的证据。
Science. 1993 Jun 11;260(5114):1646-9. doi: 10.1126/science.8503010.
3
Atomic force microscopy of biochemically tagged DNA.生物化学标记DNA的原子力显微镜检查
铁摄取调节因子(Fur)和铁可用性控制抗菌肽微菌素 E492 的产生和成熟。
PLoS One. 2018 Aug 2;13(8):e0200835. doi: 10.1371/journal.pone.0200835. eCollection 2018.
4
Redox Sensing by Fe in Bacterial Fur Family Metalloregulators.细菌菌毛家族金属调控蛋白中铁的氧化还原感应。
Antioxid Redox Signal. 2018 Dec 20;29(18):1858-1871. doi: 10.1089/ars.2017.7359. Epub 2017 Oct 31.
5
Zinc-dependent regulation of zinc import and export genes by Zur.锌依赖的 Zur 调控锌的输入和输出基因。
Nat Commun. 2017 Jun 9;8:15812. doi: 10.1038/ncomms15812.
6
Metal-responsive promoter DNA compaction by the ferric uptake regulator.铁摄取调节蛋白诱导的金属反应启动子 DNA 紧缩
Nat Commun. 2016 Aug 25;7:12593. doi: 10.1038/ncomms12593.
7
Transcript degradation and noise of small RNA-controlled genes in a switch activated network in Escherichia coli.大肠杆菌中一个开关激活网络中小RNA调控基因的转录本降解与噪声
Nucleic Acids Res. 2016 Aug 19;44(14):6707-20. doi: 10.1093/nar/gkw273. Epub 2016 Apr 16.
8
Positive autoregulation of mrkHI by the cyclic di-GMP-dependent MrkH protein in the biofilm regulatory circuit of Klebsiella pneumoniae.在肺炎克雷伯菌生物膜调节回路中,环二鸟苷依赖性的MrkH蛋白对mrkHI进行正向自调节。
J Bacteriol. 2015 May;197(9):1659-67. doi: 10.1128/JB.02615-14. Epub 2015 Mar 2.
9
Borrelia burgdorferi oxidative stress regulator BosR directly represses lipoproteins primarily expressed in the tick during mammalian infection.伯氏疏螺旋体氧化应激调节因子 BosR 直接抑制在哺乳动物感染期间主要在蜱中表达的脂蛋白。
Mol Microbiol. 2013 Sep;89(6):1140-53. doi: 10.1111/mmi.12337. Epub 2013 Aug 14.
10
Detailed analysis of Helicobacter pylori Fur-regulated promoters reveals a Fur box core sequence and novel Fur-regulated genes.详细分析幽门螺杆菌 Fur 调控启动子揭示了 Fur 盒核心序列和新的 Fur 调控基因。
Mol Microbiol. 2012 Jun;84(5):921-41. doi: 10.1111/j.1365-2958.2012.08066.x. Epub 2012 May 14.
Proc Natl Acad Sci U S A. 1993 May 1;90(9):3811-4. doi: 10.1073/pnas.90.9.3811.
4
Protein-induced bending as a transcriptional switch.蛋白质诱导的弯曲作为一种转录开关。
Science. 1993 May 7;260(5109):805-7. doi: 10.1126/science.8387228.
5
Selective DNA bending by a variety of bZIP proteins.多种碱性亮氨酸拉链蛋白对DNA的选择性弯曲
Mol Cell Biol. 1993 Sep;13(9):5479-89. doi: 10.1128/mcb.13.9.5479-5489.1993.
6
Conformational analysis of a 139 base-pair DNA fragment containing a single-stranded break and its interaction with human poly(ADP-ribose) polymerase.包含单链断裂的139个碱基对DNA片段的构象分析及其与人聚(ADP - 核糖)聚合酶的相互作用。
J Mol Biol. 1994 Jan 21;235(3):1062-71. doi: 10.1006/jmbi.1994.1057.
7
Fur (ferric uptake regulation) protein interaction with target DNA: comparison of gel retardation, footprinting and electron microscopy analyses.Fur(铁摄取调节)蛋白与靶DNA的相互作用:凝胶阻滞、足迹法和电子显微镜分析的比较
Biochem Biophys Res Commun. 1994 May 30;201(1):346-55. doi: 10.1006/bbrc.1994.1708.
8
Electron microscope observation of a fibre structure formed by non-specific binding of cAMP receptor protein to DNA.通过环磷酸腺苷受体蛋白与DNA的非特异性结合形成的纤维结构的电子显微镜观察。
J Mol Biol. 1981 Aug 15;150(3):435-9. doi: 10.1016/0022-2836(81)90558-1.
9
Characterization by electron microscopy of the complex formed between T4 bacteriophage gene 32-protein and DNA.通过电子显微镜对T4噬菌体基因32蛋白与DNA形成的复合物进行表征。
J Mol Biol. 1972 Jun 28;67(3):341-50. doi: 10.1016/0022-2836(72)90454-8.
10
A new preparation method for dark-field electron microscopy of biomacromolecules.一种用于生物大分子暗场电子显微镜观察的新制备方法。
J Ultrastruct Res. 1971 Apr;35(1):147-67. doi: 10.1016/s0022-5320(71)80148-x.