Korneev S, Blackshaw S, Davies J A
Institute of Genetics, Glasgow University, U.K.
Prog Neurobiol. 1994 Feb;42(2):339-46. doi: 10.1016/0301-0082(94)90074-4.
One of the most powerful approaches to the molecular analysis of differential gene expression is to construct cDNA libraries corresponding to different tissues or developmental stages, and then to enrich for genes expressed in a particular tissue or at a particular time by subtractive hybridisation. Our aim is to reduce the complexity of neuronal cDNA libraries by generating libraries from the mRNA of a single cell. The system chosen is the Retzius cell of the leech, a large neurone which can be unambiguously dissected out. A cDNA library was generated from one leech ganglion (containing about 400 neurons) by anchor 1-oligo dT priming, the addition of dG tails, second strand synthesis primed by an anchor 2-oligo dC primer, followed by PCR from the two anchor regions. XBaI and EcoRI sites were included in the respective anchor primers, between the dT or dC run and the PCR primer sequence, allowing high-efficiency directional cloning. Eight clones picked and sequenced at random gave five with some homology to a known protein and three novel genes. The average insert size in the library was 600 bp, 0.2% of the clones hybridised to repetitive DNA, and 20/30,000 clones gave signals with the Drosophila actin gene. This approach has now been extended to a few pooled Retzius cells.
差异基因表达分子分析最有效的方法之一是构建对应于不同组织或发育阶段的cDNA文库,然后通过扣除杂交富集在特定组织或特定时间表达的基因。我们的目标是通过从单个细胞的mRNA生成文库来降低神经元cDNA文库的复杂性。所选择的系统是水蛭的雷特缪斯细胞,这是一种可以明确分离出来的大神经元。通过锚定1 - 寡聚dT引发、添加dG尾、由锚定2 - 寡聚dC引物引发第二链合成,然后从两个锚定区域进行PCR,从一个水蛭神经节(包含约400个神经元)生成了一个cDNA文库。在各自的锚定引物中,在dT或dC序列段与PCR引物序列之间包含了XbaI和EcoRI位点,从而实现高效定向克隆。随机挑选并测序的8个克隆中有5个与已知蛋白质有一定同源性,3个为新基因。文库中的平均插入片段大小为600 bp,0.2%的克隆与重复DNA杂交,30000个克隆中有20个与果蝇肌动蛋白基因产生信号。这种方法现已扩展到一些汇集的雷特缪斯细胞。