[Structure analysis of the mitochondrial tRNA(Cys) gene and the original region of light-strand replication from carp].

In this study, we have determined the nucleotide sequences of the cysteine tRNA gene and the original region of light-strand replication from carp (Cyprinus carpio L.) mitochondrion, which were further represented respectively in cloverleaf secondary structure and stem loop structure. By comparing the nucleotide sequences of 5 vertebrate tRNA(Cys) genes, it is found that carp mitochondrial tRNA(Cys) gene have many unusual structural features differing from those of cytoplasmic tRNA(Cys) gene. The carp mitochondrial original region of light-strand replication consists of 36 bases which include 11 base pairs in its stem and 14 bases in its loop. By making a comparison between the nucleotide sequences of the carp original region of light-strand replication and those of other 10 vertebrates, it is further found that stem sequence of carp is very conservative while loop sequence is very variable. This result indicates that stem structure may play an important role in the replication of light strand.