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早期反应基因Tis11家族人类成员ERF-1的克隆与特性分析

Cloning and characterization of ERF-1, a human member of the Tis11 family of early-response genes.

作者信息

Bustin S A, Nie X F, Barnard R C, Kumar V, Pascall J C, Brown K D, Leigh I M, Williams N S, McKay I A

机构信息

Surgical Unit, London Hospital Medical College, University of London, UK.

出版信息

DNA Cell Biol. 1994 May;13(5):449-59. doi: 10.1089/dna.1994.13.449.

Abstract

Members of the Tis11 family of early-response genes are characterized by a high degree of sequence similarity around a putative zinc finger motif. They are induced by a variety of cell agonists and polypeptide mitogens, including 12-O-tetradecanoylphorbol-13-acetate (TPA) and epidermal growth factor (EGF). We describe the cloning and sequencing of a human member of this gene family, EGF-response factor 1 (ERF-1), the homolog of the mouse Tis11b/rat cMG1 genes. The human and rodent genes are similar, with 5' UTR, coding sequence, and 3' UTR highly conserved. The promoter/enhancer region and intron sequences contain multiple putative transcription factor binding motifs characteristic of early-response genes. Amino acid sequence comparison of the seven members of the Tis11 family cloned so far identifies a repeated consensus motif of (x+)YKTELC(x+)x5GxCxYGx(x+)CxFxH involving the potential zinc finger. Toward the carboxyterminal end is a region with a high percentage of prolines (15/73) and, partially overlapping, a serine-rich domain (20/54). These may be important as trans-activation and phosphorylation sites. The 3' untranslated region is unusually long, extending over 1,860 bp. The sequence immediately downstream from the translational stop codon has extensive secondary structure potential. The 3' UTR is 60% AT rich, but contains two GC rich (> 70%) regions. In addition there are multiple reiterations of a destabilization sequence, as well as a single UUAUUUAU motif characteristic of mRNAs specifying proteins involved in the inflammatory response. The mRNA contains a consensus polyadenylation signal.

摘要

早期反应基因Tis11家族的成员,其特征是在一个假定的锌指基序周围具有高度的序列相似性。它们可被多种细胞激动剂和多肽有丝分裂原诱导,包括12 - O - 十四烷酰佛波醇 - 13 - 乙酸酯(TPA)和表皮生长因子(EGF)。我们描述了该基因家族的一个人类成员——EGF反应因子1(ERF - 1)的克隆和测序,它是小鼠Tis11b/大鼠cMG1基因的同源物。人类和啮齿动物的基因相似,5'非翻译区(UTR)、编码序列和3' UTR高度保守。启动子/增强子区域和内含子序列包含多个早期反应基因特有的假定转录因子结合基序。对迄今克隆的Tis11家族的七个成员进行氨基酸序列比较,确定了一个重复的共有基序(x+)YKTELC(x+)x5GxCxYGx(x+)CxFxH,涉及潜在的锌指。在羧基末端是一个脯氨酸含量很高的区域(15/73),并且部分重叠的是一个富含丝氨酸的结构域(20/54)。这些可能作为反式激活和磷酸化位点很重要。3'非翻译区异常长,延伸超过1860 bp。翻译终止密码子下游紧邻的序列具有广泛的二级结构潜力。3' UTR富含60%的AT,但包含两个富含GC(>70%)的区域。此外,有一个去稳定序列的多个重复,以及一个指定参与炎症反应的蛋白质的mRNA特有的单个UUAUUUAU基序。该mRNA包含一个共有多聚腺苷酸化信号。

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