• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

木糖葡萄球菌脲酶活性位点处存在的是苏氨酸而非半胱氨酸。

Threonine is present instead of cysteine at the active site of urease from Staphylococcus xylosus.

作者信息

Jose J, Schäfer U K, Kaltwasser H

机构信息

Lehrstuhl für Mikrobiologie, Universität des Saarlandes, Saarbrücken, Germany.

出版信息

Arch Microbiol. 1994;161(5):384-92. doi: 10.1007/BF00288947.

DOI:10.1007/BF00288947
PMID:8042900
Abstract

DNA sequence analysis of the structural urease genes from Staphylococcus xylosus revealed that three enzyme subunits are encoded in the order of 11,000, 15,400 and 61,000 (mol. mass), which correspond to the single polypeptide chain of jack bean urease (90,800). Comparing the deduced amino acid sequence of S. xylosus urease with the amino acid sequence of jack bean urease an overall portion of 56% identical residues was found. For S. xylosus urease a subunit structure of (alpha beta gamma)4 was proposed, based on the comparison of the deduced amino acid content of the enzyme subunits with the total amino acid content of the purified enzyme. The staphylococcal enzyme contained no cysteine, as deduced from DNA sequence and confirmed by the determination of the total amino acid content in the purified enzyme. Instead of cysteine, known to be catalytically essential in the plant enzyme, and conserved among all bacterial ureases analyzed so far, threonine was found in S. xylosus. This amino acid-exchange was located within a highly conserved domain of 17 amino acids, supposed to be part of the active site. Sequence analysis of the respective region of Staphylococcus saprophyticus urease showed that it also contains threonine instead of cysteine. In contrast to jack bean urease S. xylosus urease was not affected by the SH-group inhibitor dipyridyl disulfide but was completely inhibited by the serine protease inhibitor phenylmethanesulfonyl fluoride. The presented results indicate that in these staphylococcal strains urea hydrolysis might function in a manner similar to the peptide bond cleavage by chymotrypsin.

摘要

木糖葡萄球菌结构脲酶基因的DNA序列分析表明,三个酶亚基按11,000、15,400和61,000(分子量)的顺序编码,这与刀豆脲酶的单条多肽链(90,800)相对应。将木糖葡萄球菌脲酶的推导氨基酸序列与刀豆脲酶的氨基酸序列进行比较,发现相同残基的总体比例为56%。基于酶亚基推导氨基酸含量与纯化酶总氨基酸含量的比较,有人提出木糖葡萄球菌脲酶的亚基结构为(αβγ)4 。从DNA序列推导并经纯化酶总氨基酸含量测定证实,葡萄球菌酶不含半胱氨酸。在木糖葡萄球菌中发现的是苏氨酸,而不是在植物酶中具有催化重要性且在迄今分析的所有细菌脲酶中都保守的半胱氨酸。这种氨基酸交换位于一个由17个氨基酸组成的高度保守结构域内,该结构域被认为是活性位点的一部分。腐生葡萄球菌脲酶相应区域的序列分析表明,它也含有苏氨酸而不是半胱氨酸。与刀豆脲酶不同,木糖葡萄球菌脲酶不受SH基团抑制剂二吡啶二硫化物的影响,但被丝氨酸蛋白酶抑制剂苯甲基磺酰氟完全抑制。给出的结果表明,在这些葡萄球菌菌株中,尿素水解的作用方式可能类似于胰凝乳蛋白酶对肽键的裂解。

相似文献

1
Threonine is present instead of cysteine at the active site of urease from Staphylococcus xylosus.木糖葡萄球菌脲酶活性位点处存在的是苏氨酸而非半胱氨酸。
Arch Microbiol. 1994;161(5):384-92. doi: 10.1007/BF00288947.
2
Urease from Staphylococcus saprophyticus: purification, characterization and comparison to Staphylococcus xylosus urease.
Arch Microbiol. 1994;161(5):393-9. doi: 10.1007/BF00288948.
3
Proteus mirabilis urease: nucleotide sequence determination and comparison with jack bean urease.奇异变形杆菌脲酶:核苷酸序列测定及与刀豆脲酶的比较。
J Bacteriol. 1989 Dec;171(12):6414-22. doi: 10.1128/jb.171.12.6414-6422.1989.
4
Molecular docking of Glycine max and Medicago truncatula ureases with urea; bioinformatics approaches.大豆和蒺藜苜蓿脲酶与尿素的分子对接;生物信息学方法
Mol Biol Rep. 2016 Mar;43(3):129-40. doi: 10.1007/s11033-016-3945-7. Epub 2016 Feb 6.
5
Crystal structure of the first plant urease from jack bean: 83 years of journey from its first crystal to molecular structure.首株刀豆脲酶的晶体结构:从首次结晶到分子结构的 83 年探索历程。
J Mol Biol. 2010 Jul 16;400(3):274-83. doi: 10.1016/j.jmb.2010.05.009. Epub 2010 May 13.
6
Cloning of the genes encoding urease from Proteus vulgaris and sequencing of the structural genes.
FEMS Microbiol Lett. 1990 Jan 1;54(1-3):67-73. doi: 10.1016/0378-1097(90)90260-w.
7
The structure of jack bean urease. The complete amino acid sequence, limited proteolysis and reactive cysteine residues.刀豆脲酶的结构。完整氨基酸序列、有限蛋白酶解及反应性半胱氨酸残基
Eur J Biochem. 1988 Jul 15;175(1):151-65. doi: 10.1111/j.1432-1033.1988.tb14177.x.
8
Cloning and expression of various staphylococcal genes encoding urease in Staphylococcus carnosus.
FEMS Microbiol Lett. 1991 May 15;64(2-3):277-81. doi: 10.1016/0378-1097(91)90609-e.
9
Location of the essential cysteine residue of jack bean urease.刀豆脲酶必需半胱氨酸残基的位置
Protein Seq Data Anal. 1987;1(2):103-6.
10
Ureases of extreme halophiles of the genus Haloarcula with a unique structure of gene cluster.具有独特基因簇结构的嗜盐嗜碱菌属极端嗜盐菌的脲酶
Biosci Biotechnol Biochem. 2004 Feb;68(2):397-406. doi: 10.1271/bbb.68.397.

引用本文的文献

1
Transcriptomic analysis of Staphylococcus xylosus in the presence of nitrate and nitrite in meat reveals its response to nitrosative stress.肉类中存在硝酸盐和亚硝酸盐时木糖葡萄球菌的转录组分析揭示了其对亚硝化应激的反应。
Front Microbiol. 2014 Dec 15;5:691. doi: 10.3389/fmicb.2014.00691. eCollection 2014.
2
A bifunctional urease enhances survival of pathogenic Yersinia enterocolitica and Morganella morganii at low pH.一种双功能脲酶可提高致病性小肠结肠炎耶尔森菌和摩根氏摩根菌在低pH值环境下的存活率。
J Bacteriol. 1996 Nov;178(22):6487-95. doi: 10.1128/jb.178.22.6487-6495.1996.
3
Urease from Staphylococcus saprophyticus: purification, characterization and comparison to Staphylococcus xylosus urease.

本文引用的文献

1
Protein measurement with the Folin phenol reagent.使用福林酚试剂进行蛋白质测定。
J Biol Chem. 1951 Nov;193(1):265-75.
2
SULFONYL FLUORIDES AS INHIBITORS OF ESTERASES. II. FORMATION AND REACTIONS OF PHENYLMETHANESULFONYL ALPHA-CHYMOTRYPSIN.磺酰氟作为酯酶抑制剂。II. 苯甲磺酰α-胰凝乳蛋白酶的形成与反应。
Biochemistry. 1964 Jun;3:783-91. doi: 10.1021/bi00894a009.
3
Modified reagents for determination of urea and ammonia.用于测定尿素和氨的改良试剂。
Arch Microbiol. 1994;161(5):393-9. doi: 10.1007/BF00288948.
4
Molecular biology of microbial ureases.微生物脲酶的分子生物学
Microbiol Rev. 1995 Sep;59(3):451-80. doi: 10.1128/mr.59.3.451-480.1995.
Clin Chem. 1962 Apr;8:130-2.
4
Unique features in the ribosome binding site sequence of the gram-positive Staphylococcus aureus beta-lactamase gene.革兰氏阳性金黄色葡萄球菌β-内酰胺酶基因核糖体结合位点序列的独特特征。
J Biol Chem. 1981 Nov 10;256(21):11283-91.
5
Jack bean urease (EC 3.5.1.5). V. On the mechanism of action of urease on urea, formamide, acetamide, N-methylurea, and related compounds.刀豆脲酶(EC 3.5.1.5)。五、脲酶对尿素、甲酰胺、乙酰胺、N-甲基脲及相关化合物的作用机制
Can J Biochem. 1980 Dec;58(12):1335-44. doi: 10.1139/o80-181.
6
Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.用核酸外切酶III进行单向消化可为DNA测序创建靶向断点。
Gene. 1984 Jun;28(3):351-9. doi: 10.1016/0378-1119(84)90153-7.
7
Determination of sulfhydryl groups with 2,2'- or 4,4'-dithiodipyridine.用2,2'-或4,4'-二硫代二吡啶测定巯基
Arch Biochem Biophys. 1967 Mar;119(1):41-9. doi: 10.1016/0003-9861(67)90426-2.
8
The chromatographic determination of cystine and cysteine residues in proteins as s-beta-(4-pyridylethyl)cysteine.蛋白质中胱氨酸和半胱氨酸残基作为s-β-(4-吡啶基乙基)半胱氨酸的色谱测定法。
J Biol Chem. 1970 Aug 10;245(15):3868-71.
9
Cleavage of structural proteins during the assembly of the head of bacteriophage T4.在噬菌体T4头部组装过程中结构蛋白的切割
Nature. 1970 Aug 15;227(5259):680-5. doi: 10.1038/227680a0.
10
Jack bean urease (EC 3.5.1.5). A new purification and reliable rate assay.
Biochemistry. 1969 May;8(5):1984-90. doi: 10.1021/bi00833a031.