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表达序列标签(EST)可识别在鲶鱼化学感应组织中优先表达的基因。

Expressed sequence tags (EST) identify genes preferentially expressed in catfish chemosensory tissues.

作者信息

Bettini E, Porta A R, Dahmen N, Wang H, Margolis F L

机构信息

Roche Institute of Molecular Biology, Roche Research Center, Nutley, NJ 07110.

出版信息

Brain Res Mol Brain Res. 1994 Jun;23(4):285-91. doi: 10.1016/0169-328x(94)90237-2.

Abstract

Expressed sequence tags (ESTs) for the catfish (Ictalurus punctatus) were identified and characterized by shotgun sequencing coupled to Northern analysis. We have identified and characterized a number of cDNA clones from a catfish olfactory mucosal library that show differential tissue expression including several that are enriched in chemosensory tissue. Among the novel cDNA clones studied were an olfactory specific beta-tubulin and a novel member of the S-100 family of calcium-binding proteins that is highly expressed in barbel, olfactory mucosa and gill, but not in brain. Several clones of low abundance mRNAs were also identified, including one manifesting a basic-helix-loop-helix (b-HLH) motif that is typical of many transcription factors. Additional cDNA clones whose mRNAs are differentially expressed, but are of unknown function, were also obtained. These results demonstrate the case with which novel gene products enriched in chemosensory tissues can be identified.

摘要

通过鸟枪法测序结合Northern分析,对鲶鱼(斑点叉尾鮰)的表达序列标签(EST)进行了鉴定和表征。我们从鲶鱼嗅觉黏膜文库中鉴定并表征了多个cDNA克隆,这些克隆显示出不同的组织表达,包括一些在化学感应组织中富集的克隆。在研究的新cDNA克隆中,有一个嗅觉特异性β-微管蛋白和一个S-100钙结合蛋白家族的新成员,该成员在触须、嗅觉黏膜和鳃中高度表达,但在脑中不表达。还鉴定了几个低丰度mRNA的克隆,包括一个表现出许多转录因子典型的碱性-螺旋-环-螺旋(b-HLH)基序的克隆。此外,还获得了一些mRNA差异表达但功能未知的cDNA克隆。这些结果证明了鉴定化学感应组织中富集的新基因产物的可行性。

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