Flaherty K M, Wilbanks S M, DeLuca-Flaherty C, McKay D B
Beckman Laboratories for Structural Biology, Department of Cell Biology, Stanford University School of Medicine, California 94305.
J Biol Chem. 1994 Apr 29;269(17):12899-907.
The ATPase fragment of the bovine 70-kDa heat shock cognate protein is an attractive construct in which to study its mechanism of ATP hydrolysis. The three-dimensional structure suggests several residues that might participate in the ATPase reaction. Four acidic residues (Asp-10, Glu-175, Asp-199, and Asp-206) have been individually mutated to both the cognate amine (asparagine/glutamine) and to serine, and the effects of the mutations on the kinetics of the ATPase activity (Wilbanks, S. M., DeLuca-Flaherty, C., and McKay, D. B. (1994) J. Biol. Chem. 269, 12893-12898) and the structure of the mutant ATPase fragments have been determined, typically to approximately 2.4 A resolution. Additionally, the structures of the wild type protein complexed with MgADP and Pi, MgAMPPNP (5'-adenylyl-beta, gamma-imidodiphosphate) and CaAMPPNP have been refined to 2.1, 2.4, and 2.4 A, respectively. Combined, these structures provide models for the prehydrolysis, MgATP-bound state and the post-hydrolysis, MgADP-bound state of the ATPase fragment. These models suggest a pathway for the hydrolytic reaction in which 1) the gamma phosphate of bound ATP reorients to form a beta, gamma-bidentate phosphate complex with the Mg2+ ion, allowing 2) in-line nucleophilic attack on the gamma phosphate by a H2O molecule or OH- ion, with 3) subsequent release of inorganic phosphate.
牛70 kDa热休克同源蛋白的ATP酶片段是研究其ATP水解机制的一个有吸引力的构建体。三维结构表明了几个可能参与ATP酶反应的残基。四个酸性残基(Asp-10、Glu-175、Asp-199和Asp-206)已分别突变为相应的胺(天冬酰胺/谷氨酰胺)和丝氨酸,并确定了这些突变对ATP酶活性动力学的影响(Wilbanks, S. M., DeLuca-Flaherty, C., and McKay, D. B. (1994) J. Biol. Chem. 269, 12893-12898),同时也确定了突变型ATP酶片段的结构,分辨率通常约为2.4 Å。此外,与MgADP和Pi、MgAMPPNP(5'-腺苷-β,γ-亚氨二磷酸)以及CaAMPPNP复合的野生型蛋白结构分别已精修至2.1 Å、2.4 Å和2.4 Å。综合起来,这些结构为ATP酶片段的预水解、MgATP结合状态以及水解后、MgADP结合状态提供了模型。这些模型提出了一个水解反应途径,其中1)结合的ATP的γ磷酸基团重新定向,与Mg2+离子形成β,γ-双齿磷酸复合物,从而允许2)一个H2O分子或OH-离子对γ磷酸基团进行亲核进攻,接着3)释放无机磷酸。