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Cyclic peptides as proteases: a reevaluation.作为蛋白酶的环肽:重新评估
Proc Natl Acad Sci U S A. 1994 May 10;91(10):4106-9. doi: 10.1073/pnas.91.10.4106.
2
A reinvestigation of a synthetic peptide (TrPepz) designed to mimic trypsin.对一种旨在模拟胰蛋白酶的合成肽(TrPepz)的重新研究。
Proc Natl Acad Sci U S A. 1994 May 10;91(10):4110-4. doi: 10.1073/pnas.91.10.4110.
3
Design of peptide enzymes (pepzymes): surface-simulation synthetic peptides that mimic the chymotrypsin and trypsin active sites exhibit the activity and specificity of the respective enzyme.肽酶(pepzyme)的设计:模拟胰凝乳蛋白酶和胰蛋白酶活性位点的表面模拟合成肽表现出相应酶的活性和特异性。
Proc Natl Acad Sci U S A. 1993 Sep 1;90(17):8282-6. doi: 10.1073/pnas.90.17.8282.
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Can small cyclic peptides have the activity and specificity of proteolytic enzymes?小环肽能否具有蛋白水解酶的活性和特异性?
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[Substrate specificity of collagenolytic proteases from the hepatopancreas of the of the Kamchatka crab].[堪察加蟹肝胰腺中胶原分解蛋白酶的底物特异性]
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Hydrolysis of cyclic depsidipeptides by trypsin or chymotrypsin.胰蛋白酶或糜蛋白酶对环状缩酚酸肽的水解作用。
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c[D-pro-Pro-D-pro-N-methyl-Ala] adopts a rigid conformation that serves as a scaffold to mimic reverse-turns.环[D-脯氨酸-脯氨酸-D-脯氨酸-N-甲基丙氨酸]呈现出一种刚性构象,该构象作为一种支架来模拟反向转角。
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Introduction of non-natural amino acid residues into the substrate-specific P1 position of trypsin inhibitor SFTI-1 yields potent chymotrypsin and cathepsin G inhibitors.将非天然氨基酸残基引入胰蛋白酶抑制剂SFTI-1的底物特异性P1位置可产生有效的糜蛋白酶和组织蛋白酶G抑制剂。
Bioorg Med Chem. 2009 May 1;17(9):3302-7. doi: 10.1016/j.bmc.2009.03.045. Epub 2009 Mar 27.

引用本文的文献

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Molecular glues for manipulating enzymes: trypsin inhibition by benzamidine-conjugated molecular glues.用于操控酶的分子胶水:苯甲脒共轭分子胶水对胰蛋白酶的抑制作用
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Synthesis of functionalised nucleosides for incorporation into nucleic acid-based serine protease mimics.用于掺入基于核酸的丝氨酸蛋白酶模拟物中的功能化核苷的合成。
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On the failure of de novo-designed peptides as biocatalysts.关于从头设计的肽作为生物催化剂的失败情况。
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Synthesis and conformational analysis by 1H NMR and restrained molecular dynamics simulations of the cyclic decapeptide [Ser-Tyr-Ser-Met-Glu-His-Phe-Arg-Trp-Gly].通过¹H NMR和受限分子动力学模拟对环十肽[Ser-Tyr-Ser-Met-Glu-His-Phe-Arg-Trp-Gly]进行合成与构象分析
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6
Structure of a cyclic peptide with a catalytic triad, determined by computer simulation and NMR spectroscopy.通过计算机模拟和核磁共振光谱确定的具有催化三联体的环肽结构。
J Comput Aided Mol Des. 1996 Feb;10(1):11-22. doi: 10.1007/BF00124461.
7
A reinvestigation of a synthetic peptide (TrPepz) designed to mimic trypsin.对一种旨在模拟胰蛋白酶的合成肽(TrPepz)的重新研究。
Proc Natl Acad Sci U S A. 1994 May 10;91(10):4110-4. doi: 10.1073/pnas.91.10.4110.
8
Can small cyclic peptides have the activity and specificity of proteolytic enzymes?小环肽能否具有蛋白水解酶的活性和特异性?
Proc Natl Acad Sci U S A. 1994 May 10;91(10):4103-5. doi: 10.1073/pnas.91.10.4103.

本文引用的文献

1
A modified spectrophotometric determination of chymotrypsin, trypsin, and thrombin.一种改进的分光光度法测定胰凝乳蛋白酶、胰蛋白酶和凝血酶。
Can J Biochem Physiol. 1959 Dec;37:1393-9.
2
Determination of the individual rate constants of alpha-chymotrypsin-catalyzed hydrolysis with the added nucleophilic agent, 1,4-butanediol.测定添加亲核试剂1,4-丁二醇后α-胰凝乳蛋白酶催化水解的各个速率常数。
FEBS Lett. 1971 Jun 10;15(2):121-124. doi: 10.1016/0014-5793(71)80037-6.
3
Design of peptide enzymes (pepzymes): surface-simulation synthetic peptides that mimic the chymotrypsin and trypsin active sites exhibit the activity and specificity of the respective enzyme.肽酶(pepzyme)的设计:模拟胰凝乳蛋白酶和胰蛋白酶活性位点的表面模拟合成肽表现出相应酶的活性和特异性。
Proc Natl Acad Sci U S A. 1993 Sep 1;90(17):8282-6. doi: 10.1073/pnas.90.17.8282.
4
A reinvestigation of a synthetic peptide (TrPepz) designed to mimic trypsin.对一种旨在模拟胰蛋白酶的合成肽(TrPepz)的重新研究。
Proc Natl Acad Sci U S A. 1994 May 10;91(10):4110-4. doi: 10.1073/pnas.91.10.4110.
5
Structure and specific binding of trypsin: comparison of inhibited derivatives and a model for substrate binding.胰蛋白酶的结构与特异性结合:抑制衍生物的比较及底物结合模型
J Mol Biol. 1974 Feb 25;83(2):209-30. doi: 10.1016/0022-2836(74)90388-x.
6
Determination of the operational molarity of solutions of bovine alpha-chymotrypsin, trypsin, thrombin and factor Xa by spectrofluorimetric titration.通过荧光光谱滴定法测定牛α-糜蛋白酶、胰蛋白酶、凝血酶和Xa因子溶液的操作摩尔浓度。
Biochem J. 1973 Jan;131(1):107-17. doi: 10.1042/bj1310107.
7
Identification of novel peptide antagonists for GPIIb/IIIa from a conformationally constrained phage peptide library.从构象受限噬菌体肽库中鉴定新型糖蛋白IIb/IIIa肽拮抗剂。
Proteins. 1992 Dec;14(4):509-15. doi: 10.1002/prot.340140411.

作为蛋白酶的环肽:重新评估

Cyclic peptides as proteases: a reevaluation.

作者信息

Corey D R, Phillips M A

机构信息

Department of Pharmacology, University of Texas Southwestern Medical Center at Dallas.

出版信息

Proc Natl Acad Sci U S A. 1994 May 10;91(10):4106-9. doi: 10.1073/pnas.91.10.4106.

DOI:10.1073/pnas.91.10.4106
PMID:8183879
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC43733/
Abstract

A recent report [Atassi, M. Z. and Manshouri, T. (1993) Proc. Natl. Acad. Sci. USA 90, 8282-8286] described the design and synthesis of two 29-amino acid cyclic peptides that were reported to hydrolyze both ester and amide bonds with chymotrypsin-like or trypsin-like specificity. We have synthesized the trypsin-mimic peptide (TrPepz) and detect no activity toward either ester or peptide substrates. The same result was independently obtained by Wells et al. [Wells, J. A., Fairbrother, W. J., Otlewski, J., Laskowski, M., Jr., & Burnier, J. (1994) Proc. Natl. Acad. Sci. USA 91, 4110-4114.] Additionally, we found that Atassi and Manshouri failed to obtain accurate kinetic constants for trypsin- and chymotrypsin-catalyzed ester hydrolysis because the high concentrations of trypsin and chymotrypsin that they report using would have prevented evaluation of initial rates. These findings are incompatible with the claims, reported by Atassi and Manshouri, that TrPepz has trypsin-like activity.

摘要

最近的一份报告[阿塔西,M. Z. 和曼苏里,T.(1993年)《美国国家科学院院刊》90,8282 - 8286]描述了两种29个氨基酸的环肽的设计与合成,据报道这两种环肽能以类似胰凝乳蛋白酶或类似胰蛋白酶的特异性水解酯键和酰胺键。我们合成了类胰蛋白酶肽(TrPepz),但未检测到其对酯底物或肽底物有任何活性。韦尔斯等人[韦尔斯,J. A.,费尔布拉泽,W. J.,奥特列夫斯基,J.,拉斯科夫斯基,M.,Jr.,& 伯尼尔,J.(1994年)《美国国家科学院院刊》91,4110 - 4114]独立得到了相同的结果。此外,我们发现阿塔西和曼苏里未能获得胰蛋白酶和胰凝乳蛋白酶催化酯水解的准确动力学常数,因为他们报告中使用的高浓度胰蛋白酶和胰凝乳蛋白酶会阻碍对初始速率的评估。这些发现与阿塔西和曼苏里所声称的TrPepz具有类胰蛋白酶活性不相符。