• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

果蝇背侧形态发生素通过与沉默元件相互作用来抑制类原肠胚基因。

The Drosophila dorsal morphogen represses the tolloid gene by interacting with a silencer element.

作者信息

Kirov N, Childs S, O'Connor M, Rushlow C

机构信息

Roche Institute of Molecular Biology, Roche Research Center, Nutley, New Jersey 07110.

出版信息

Mol Cell Biol. 1994 Jan;14(1):713-22. doi: 10.1128/mcb.14.1.713-722.1994.

DOI:10.1128/mcb.14.1.713-722.1994
PMID:8264640
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC358420/
Abstract

The dorsal protein (DL) regulates the transcriptional activity of several genes that determine cell fate along the dorsoventral axis of the Drosophila melanogaster embryo. DL is present at high levels in ventral nuclei, where it activates some genes (twi and sna) and represses others (zen, dpp, and tld). DL shows homology to the Rel family of proteins and interacts with specific DNA sequences in the regulatory regions of its target genes. The distal portion of the zen gene acts as a silencer that can mediate the repression of a heterologous promoter in ventral regions of the embryo. It contains four DL binding sites which alone are sufficient for activation but not repression. Here we analyze the interaction of DL with another one of its repressed targets, the tolloid (tld) gene. Approximately 800 bp of 5'-flanking sequences upstream of the tld coding region were shown to drive an expression pattern indistinguishable from the wild-type pattern. A 423-bp fragment located within these sequences contains two DL binding sites and was shown to act as a silencer to mediate ventral repression. Point mutations in the sites abolish not only DNA binding but also ventral repression. We discuss a comparison of the DNA sequences from the zen and tld promoters and the possible mechanisms of transcriptional silencing.

摘要

背侧蛋白(DL)调节多个基因的转录活性,这些基因决定了黑腹果蝇胚胎背腹轴上的细胞命运。DL在腹侧细胞核中含量很高,在那里它激活一些基因(twi和sna)并抑制其他基因(zen、dpp和tld)。DL与Rel家族蛋白具有同源性,并与其靶基因调控区域中的特定DNA序列相互作用。zen基因的远端部分作为一个沉默子,可以介导胚胎腹侧区域中异源启动子的抑制。它包含四个DL结合位点,这些位点单独足以激活但不足以抑制。在这里,我们分析了DL与其另一个被抑制的靶标——类Toll蛋白(tld)基因之间的相互作用。tld编码区上游约800 bp的5'侧翼序列显示出与野生型模式无法区分的表达模式。位于这些序列内的一个423 bp片段包含两个DL结合位点,并被证明作为一个沉默子介导腹侧抑制。这些位点的点突变不仅消除了DNA结合,也消除了腹侧抑制。我们讨论了zen和tld启动子DNA序列的比较以及转录沉默的可能机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/aa2ba2044cf7/molcellb00001-0746-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/2567584f19a4/molcellb00001-0741-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/813d9d245fa1/molcellb00001-0742-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/85bcd4903bf9/molcellb00001-0743-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/7a1c5301932a/molcellb00001-0744-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/378510416546/molcellb00001-0744-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/aa2ba2044cf7/molcellb00001-0746-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/2567584f19a4/molcellb00001-0741-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/813d9d245fa1/molcellb00001-0742-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/85bcd4903bf9/molcellb00001-0743-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/7a1c5301932a/molcellb00001-0744-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/378510416546/molcellb00001-0744-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d415/358420/aa2ba2044cf7/molcellb00001-0746-a.jpg

相似文献

1
The Drosophila dorsal morphogen represses the tolloid gene by interacting with a silencer element.果蝇背侧形态发生素通过与沉默元件相互作用来抑制类原肠胚基因。
Mol Cell Biol. 1994 Jan;14(1):713-22. doi: 10.1128/mcb.14.1.713-722.1994.
2
Conversion of a silencer into an enhancer: evidence for a co-repressor in dorsal-mediated repression in Drosophila.沉默子向增强子的转变:果蝇中背侧介导的抑制作用中存在共抑制因子的证据。
EMBO J. 1993 Aug;12(8):3193-9. doi: 10.1002/j.1460-2075.1993.tb05988.x.
3
The interplay between multiple enhancer and silencer elements defines the pattern of decapentaplegic expression.多个增强子和沉默子元件之间的相互作用决定了“十五体瘫”基因的表达模式。
Genes Dev. 1993 Apr;7(4):694-704. doi: 10.1101/gad.7.4.694.
4
Conversion of a dorsal-dependent silencer into an enhancer: evidence for dorsal corepressors.背侧依赖性沉默子向增强子的转变:背侧共抑制因子的证据
EMBO J. 1993 Aug;12(8):3201-9. doi: 10.1002/j.1460-2075.1993.tb05989.x.
5
Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo.对成簇的背侧结合位点进行全基因组分析,可确定果蝇胚胎中的假定靶基因。
Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):763-8. doi: 10.1073/pnas.012591199. Epub 2001 Dec 18.
6
Individual dorsal morphogen binding sites mediate activation and repression in the Drosophila embryo.单个背侧形态发生素结合位点在果蝇胚胎中介导激活和抑制作用。
EMBO J. 1992 Aug;11(8):3147-54. doi: 10.1002/j.1460-2075.1992.tb05387.x.
7
The dorsal morphogen gradient regulates the mesoderm determinant twist in early Drosophila embryos.背侧形态发生素梯度在早期果蝇胚胎中调节中胚层决定因子twist。
Genes Dev. 1991 Oct;5(10):1881-91. doi: 10.1101/gad.5.10.1881.
8
HMG boxes of DSP1 protein interact with the rel homology domain of transcription factors.DSP1蛋白的HMG结构域与转录因子的rel同源结构域相互作用。
Nucleic Acids Res. 2000 Jan 15;28(2):454-62. doi: 10.1093/nar/28.2.454.
9
Quantitative analysis of binding motifs mediating diverse spatial readouts of the Dorsal gradient in the Drosophila embryo.果蝇胚胎中介导背侧梯度不同空间读数的结合基序的定量分析。
Proc Natl Acad Sci U S A. 2005 Apr 5;102(14):4966-71. doi: 10.1073/pnas.0409414102. Epub 2005 Mar 28.
10
The dorsal morphogen is a sequence-specific DNA-binding protein that interacts with a long-range repression element in Drosophila.背侧形态发生素是一种序列特异性DNA结合蛋白,它与果蝇中的一个远距离抑制元件相互作用。
Cell. 1991 Jan 25;64(2):439-46. doi: 10.1016/0092-8674(91)90651-e.

引用本文的文献

1
The dorsoventral patterning of embryos: insights into BMP/Dpp evolution from the base of the lower cyclorraphan flies.胚胎的背腹模式形成:从低等环裂蝇基部洞察BMP/Dpp的进化
Evodevo. 2018 May 16;9:13. doi: 10.1186/s13227-018-0102-5. eCollection 2018.
2
Mechanisms of Groucho-mediated repression revealed by genome-wide analysis of Groucho binding and activity.通过对Groucho结合与活性的全基因组分析揭示Groucho介导的抑制机制。
BMC Genomics. 2017 Feb 28;18(1):215. doi: 10.1186/s12864-017-3589-6.
3
Drosophila poised enhancers are generated during tissue patterning with the help of repression.

本文引用的文献

1
New eukaryotic transcriptional repressors.新型真核转录抑制因子。
Nature. 1993 Jun 17;363(6430):648-52. doi: 10.1038/363648a0.
2
Negative regulation of immunoglobulin kappa light-chain gene transcription by a short sequence homologous to the murine B1 repetitive element.一段与小鼠B1重复元件同源的短序列对免疫球蛋白κ轻链基因转录的负调控
Mol Cell Biol. 1993 Jun;13(6):3698-705. doi: 10.1128/mcb.13.6.3698-3705.1993.
3
The interplay between multiple enhancer and silencer elements defines the pattern of decapentaplegic expression.
果蝇的就绪增强子是在组织模式形成过程中借助抑制作用产生的。
Genome Res. 2017 Jan;27(1):64-74. doi: 10.1101/gr.209486.116. Epub 2016 Nov 14.
4
Synthetic enzyme-substrate tethering obviates the Tolloid-ECM interaction during Drosophila BMP gradient formation.合成酶-底物连接在果蝇BMP梯度形成过程中消除了Tolloid与细胞外基质的相互作用。
Elife. 2015 Feb 2;4:e05508. doi: 10.7554/eLife.05508.
5
Comparisons of the embryonic development of Drosophila, Nasonia, and Tribolium.果蝇、丽蝇蛹集金小蜂和赤拟谷盗胚胎发育的比较。
Wiley Interdiscip Rev Dev Biol. 2012 Jan-Feb;1(1):16-39. doi: 10.1002/wdev.3. Epub 2011 Nov 17.
6
Graded dorsal and differential gene regulation in the Drosophila embryo.果蝇胚胎中的分级背腹和差异基因调控。
Cold Spring Harb Perspect Biol. 2009 Oct;1(4):a000836. doi: 10.1101/cshperspect.a000836.
7
Brinker is a sequence-specific transcriptional repressor in the Drosophila embryo.布林克是果蝇胚胎中一种序列特异性转录抑制因子。
Genes Dev. 2001 Feb 1;15(3):261-6. doi: 10.1101/gad.861201.
8
dCtBP-dependent and -independent repression activities of the Drosophila Knirps protein.果蝇克尼普斯蛋白依赖和不依赖dCtBP的抑制活性。
Mol Cell Biol. 2000 Oct;20(19):7247-58. doi: 10.1128/MCB.20.19.7247-7258.2000.
9
Interactions between an HMG-1 protein and members of the Rel family.一种HMG-1蛋白与Rel家族成员之间的相互作用。
Proc Natl Acad Sci U S A. 1999 Sep 14;96(19):10679-83. doi: 10.1073/pnas.96.19.10679.
10
White as a reporter gene to detect transcriptional silencers specifying position-specific gene expression during Drosophila melanogaster eye development.白色作为一种报告基因,用于检测在黑腹果蝇眼睛发育过程中指定位置特异性基因表达的转录沉默子。
Genetics. 1995 Nov;141(3):1075-86. doi: 10.1093/genetics/141.3.1075.
多个增强子和沉默子元件之间的相互作用决定了“十五体瘫”基因的表达模式。
Genes Dev. 1993 Apr;7(4):694-704. doi: 10.1101/gad.7.4.694.
4
Binding affinities and cooperative interactions with bHLH activators delimit threshold responses to the dorsal gradient morphogen.与bHLH激活剂的结合亲和力和协同相互作用界定了对背侧梯度形态发生素的阈值反应。
Cell. 1993 Mar 12;72(5):741-52. doi: 10.1016/0092-8674(93)90402-c.
5
Transcriptional repression in Saccharomyces cerevisiae by a SIN3-LexA fusion protein.酿酒酵母中SIN3-LexA融合蛋白介导的转录抑制作用。
Mol Cell Biol. 1993 Mar;13(3):1805-14. doi: 10.1128/mcb.13.3.1805-1814.1993.
6
Conversion of a dorsal-dependent silencer into an enhancer: evidence for dorsal corepressors.背侧依赖性沉默子向增强子的转变:背侧共抑制因子的证据
EMBO J. 1993 Aug;12(8):3201-9. doi: 10.1002/j.1460-2075.1993.tb05989.x.
7
Conversion of a silencer into an enhancer: evidence for a co-repressor in dorsal-mediated repression in Drosophila.沉默子向增强子的转变:果蝇中背侧介导的抑制作用中存在共抑制因子的证据。
EMBO J. 1993 Aug;12(8):3193-9. doi: 10.1002/j.1460-2075.1993.tb05988.x.
8
E. coli RNA polymerase interacts homologously with two different promoters.大肠杆菌RNA聚合酶与两种不同的启动子进行同源性相互作用。
Cell. 1980 Jun;20(2):269-81. doi: 10.1016/0092-8674(80)90613-3.
9
Sequencing end-labeled DNA with base-specific chemical cleavages.通过碱基特异性化学切割对末端标记的DNA进行测序。
Methods Enzymol. 1980;65(1):499-560. doi: 10.1016/s0076-6879(80)65059-9.
10
DNA bending and its relation to nucleosome positioning.DNA弯曲及其与核小体定位的关系。
J Mol Biol. 1985 Dec 20;186(4):773-90. doi: 10.1016/0022-2836(85)90396-1.