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从人软骨中克隆富含脯氨酸/精氨酸的蛋白质(PARP),随后证明PARP是胶原蛋白α2(XI)链氨基末端结构域的一个片段。

Molecular cloning of PARP (proline/arginine-rich protein) from human cartilage and subsequent demonstration that PARP is a fragment of the NH2-terminal domain of the collagen alpha 2(XI) chain.

作者信息

Zhidkova N I, Brewton R G, Mayne R

机构信息

Department of Cell Biology, University of Alabama, Birmingham 35294.

出版信息

FEBS Lett. 1993 Jul 12;326(1-3):25-8. doi: 10.1016/0014-5793(93)81753-m.

DOI:10.1016/0014-5793(93)81753-m
PMID:8325374
Abstract

We report the molecular cloning of a proline/arginine-rich protein (called PARP) from human cartilage using the polymerase chain reaction (PCR) and degenerate oligonucleotides based on the previously published amino acid sequence of bovine PARP [1]. Subsequently, a reverse transcription-polymerase chain reaction (RT-PCR) was performed with poly(A)-rich RNA from human cartilage using a sense oligonucleotide derived from PARP and an anti-sense oligonucleotide derived from the known sequence of the human collagen alpha 2(XI) chain [2]. Nucleotide sequencing of the PCR product demonstrated that PARP is a fragment of the NH2-terminal non-collagenous (NC3) domain of the collagen alpha 2(XI) chain.

摘要

我们利用聚合酶链反应(PCR)和基于先前发表的牛脯氨酸/精氨酸丰富蛋白(PARP)氨基酸序列的简并寡核苷酸,报道了从人软骨中克隆该蛋白。随后,使用从PARP衍生的正义寡核苷酸和从人胶原蛋白α2(XI)链已知序列衍生的反义寡核苷酸,对来自人软骨的富含聚腺苷酸(poly(A))的RNA进行逆转录-聚合酶链反应(RT-PCR)。PCR产物的核苷酸测序表明,PARP是胶原蛋白α2(XI)链NH2末端非胶原(NC3)结构域的一个片段。

相似文献

1
Molecular cloning of PARP (proline/arginine-rich protein) from human cartilage and subsequent demonstration that PARP is a fragment of the NH2-terminal domain of the collagen alpha 2(XI) chain.从人软骨中克隆富含脯氨酸/精氨酸的蛋白质(PARP),随后证明PARP是胶原蛋白α2(XI)链氨基末端结构域的一个片段。
FEBS Lett. 1993 Jul 12;326(1-3):25-8. doi: 10.1016/0014-5793(93)81753-m.
2
Isolation and primary structure of PARP, a 24-kDa proline- and arginine-rich protein from bovine cartilage closely related to the NH2-terminal domain in collagen alpha 1 (XI).聚(ADP - 核糖)聚合酶的分离及一级结构,一种来自牛软骨的富含脯氨酸和精氨酸的24千道尔顿蛋白质,与胶原蛋白α1(XI)的NH2末端结构域密切相关。
J Biol Chem. 1990 Nov 25;265(33):20401-8.
3
Characterization of type II and type XI collagen synthesis by an immortalized rat chondrocyte cell line (IRC) having a low level of type II collagen mRNA expression.具有低水平II型胶原mRNA表达的永生化大鼠软骨细胞系(IRC)对II型和XI型胶原合成的特征分析
Exp Cell Res. 1994 Jul;213(1):28-36. doi: 10.1006/excr.1994.1169.
4
Different splice variants of cartilage alpha1(XI) collagen chain undergo uniform amino-terminal processing.软骨α1(XI)胶原链的不同剪接变体经历一致的氨基末端加工。
Matrix Biol. 1998 Oct;17(5):393-6. doi: 10.1016/s0945-053x(98)90091-9.
5
Structural analysis of cross-linking domains in cartilage type XI collagen. Insights on polymeric assembly.软骨XI型胶原交联结构域的结构分析。对聚合物组装的见解。
J Biol Chem. 1995 Aug 11;270(32):18865-70. doi: 10.1074/jbc.270.32.18865.
6
Processing of type XI collagen. Determination of the matrix forms of the alpha1(XI) chain.XI型胶原蛋白的加工。α1(XI)链基质形式的测定。
J Biol Chem. 1996 Sep 27;271(39):23743-8. doi: 10.1074/jbc.271.39.23743.
7
Proteomic analysis of Col11a1-associated protein complexes.胶原 11a1 相关蛋白复合物的蛋白质组学分析。
Proteomics. 2011 Dec;11(24):4660-76. doi: 10.1002/pmic.201100058. Epub 2011 Nov 23.
8
Developmental regulation of mRNA species for types II, IX and XI collagens during mouse embryogenesis.小鼠胚胎发育过程中II型、IX型和XI型胶原蛋白mRNA种类的发育调控。
Biochem J. 1997 May 15;324 ( Pt 1)(Pt 1):209-16. doi: 10.1042/bj3240209.
9
Cloning and functional expression of poly(ADP-ribose) polymerase cDNA from Sarcophaga peregrina.棕尾别麻蝇聚(ADP - 核糖)聚合酶cDNA的克隆与功能表达
Eur J Biochem. 1994 Mar 1;220(2):607-14. doi: 10.1111/j.1432-1033.1994.tb18662.x.
10
Cloning, expression, and type II collagenolytic activity of matrix metalloproteinase-13 from human osteoarthritic cartilage.人骨关节炎软骨基质金属蛋白酶-13的克隆、表达及Ⅱ型胶原酶活性
J Clin Invest. 1996 Feb 1;97(3):761-8. doi: 10.1172/JCI118475.

引用本文的文献

1
Proteomic analysis of Col11a1-associated protein complexes.胶原 11a1 相关蛋白复合物的蛋白质组学分析。
Proteomics. 2011 Dec;11(24):4660-76. doi: 10.1002/pmic.201100058. Epub 2011 Nov 23.
2
Characterization of the six zebrafish clade B fibrillar procollagen genes, with evidence for evolutionarily conserved alternative splicing within the pro-alpha1(V) C-propeptide.鉴定 6 种斑马鱼 B 族纤维状原胶原基因,在原α1(V) C 端前肽中存在进化上保守的选择性剪接证据。
Matrix Biol. 2010 May;29(4):261-75. doi: 10.1016/j.matbio.2010.01.006. Epub 2010 Jan 25.
3
Order of intron removal influences multiple splice outcomes, including a two-exon skip, in a COL5A1 acceptor-site mutation that results in abnormal pro-alpha1(V) N-propeptides and Ehlers-Danlos syndrome type I.
内含子去除顺序影响多种剪接结果,包括两外显子跳跃,这发生在一个COL5A1受体位点突变中,该突变导致异常的前α1(V)N-前肽和I型埃勒斯-当洛综合征。
Am J Hum Genet. 2002 Sep;71(3):451-65. doi: 10.1086/342099. Epub 2002 Jul 17.