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通过随机序列选择获得的胸苷激酶突变体。

Thymidine kinase mutants obtained by random sequence selection.

作者信息

Munir K M, French D C, Loeb L A

机构信息

Joseph Gottstein Memorial Cancer Research Laboratory, Department of Pathology, University of Washington, Seattle 98195.

出版信息

Proc Natl Acad Sci U S A. 1993 May 1;90(9):4012-6. doi: 10.1073/pnas.90.9.4012.

DOI:10.1073/pnas.90.9.4012
PMID:8387207
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC46436/
Abstract

Knowledge of the catalytic properties and structural information regarding the amino acid residues that comprise the active site of an enzyme allows one, in principle, to use site-specific mutagenesis to construct genes that encode enzymes with altered functions. However, such information about most enzymes is not known and the effects of specific amino acid substitutions are not generally predictable. An alternative approach is to substitute random nucleotides for key codons in a gene and to use genetic selection to identify new and interesting enzyme variants. We describe here the construction, selection, and characterization of herpes simplex virus type 1 thymidine kinase mutants either with different catalytic properties or with enhanced thermostability. From a library containing 2 x 10(6) plasmid-encoded herpes thymidine kinase genes, each with a different nucleotide sequence at the putative nucleoside binding site, we obtained 1540 active mutants. Using this library and one previously constructed, we identified by secondary selection Escherichia coli harboring thymidine kinase mutant clones that were unable to grow in the presence of concentrations of 3'-azido-3'-deoxythymidine (AZT) that permits colony formation by E. coli harboring the wild-type plasmid. Two of the mutant enzymes exhibited a reduced Km for AZT, one of which displayed a higher catalytic efficiency for AZT over thymidine relative to that of the wild type. We also identified one mutant with enhanced thermostability. These mutants may have clinical potential as the promise of gene therapy is increasingly becoming a reality.

摘要

了解构成酶活性位点的氨基酸残基的催化特性和结构信息,原则上可使人利用位点特异性诱变构建编码功能改变的酶的基因。然而,关于大多数酶的此类信息尚不清楚,特定氨基酸取代的效果通常也无法预测。另一种方法是在基因中用随机核苷酸取代关键密码子,并利用遗传筛选来鉴定新的、有趣的酶变体。我们在此描述了具有不同催化特性或增强热稳定性的1型单纯疱疹病毒胸苷激酶突变体的构建、筛选和特性分析。从一个包含2×10⁶个质粒编码的疱疹胸苷激酶基因的文库中,每个基因在假定的核苷结合位点具有不同的核苷酸序列,我们获得了1540个活性突变体。利用这个文库和一个先前构建的文库,我们通过二次筛选鉴定出携带胸苷激酶突变体克隆的大肠杆菌,这些克隆在存在允许携带野生型质粒的大肠杆菌形成菌落的3'-叠氮-3'-脱氧胸苷(AZT)浓度下无法生长。其中两个突变酶对AZT的Km值降低,其中一个相对于野生型对AZT的催化效率高于对胸苷的催化效率。我们还鉴定出一个具有增强热稳定性的突变体。随着基因治疗的前景日益成为现实,这些突变体可能具有临床应用潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1fa/46436/57e9c83c84d7/pnas01468-0248-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1fa/46436/db7f5dbca589/pnas01468-0247-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1fa/46436/57e9c83c84d7/pnas01468-0248-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1fa/46436/db7f5dbca589/pnas01468-0247-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1fa/46436/57e9c83c84d7/pnas01468-0248-a.jpg

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本文引用的文献

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A large increase in enzyme-substrate affinity by protein engineering.通过蛋白质工程实现酶 - 底物亲和力的大幅提高。
Nature. 1984;307(5947):187-8. doi: 10.1038/307187a0.
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Purification and characterization of herpes simplex virus (type 1) thymidine kinase produced in Escherichia coli by a high efficiency expression plasmid utilizing a lambda PL promoter and cI857 temperature-sensitive repressor.利用λPL启动子和cI857温度敏感型阻遏物的高效表达质粒在大肠杆菌中产生的单纯疱疹病毒1型胸苷激酶的纯化与特性分析
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通过工程化激酶使核苷类似物磷酸化用于抗病毒和癌症治疗
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Systematic exploration of active site mutations on human deoxycytidine kinase substrate specificity.对人类脱氧胞苷激酶底物特异性活性位点突变的系统探索。
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Quantitative codon optimisation of DNA libraries encoding sub-random peptides: design and characterisation of a novel library encoding transmembrane domain peptides.编码亚随机肽的DNA文库的定量密码子优化:一种编码跨膜结构域肽的新型文库的设计与表征
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Tolerance of different proteins for amino acid diversity.不同蛋白质对氨基酸多样性的耐受性。
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In vivo versus in vitro screening or selection for catalytic activity in enzymes and abzymes.酶和抗体酶催化活性的体内与体外筛选或选择
Mol Biotechnol. 1997 Feb;7(1):37-55. doi: 10.1007/BF02821543.
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Novel human DNA alkyltransferases obtained by random substitution and genetic selection in bacteria.通过细菌中的随机取代和基因筛选获得的新型人类DNA烷基转移酶。
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Exploring the active site of chorismate mutase by combinatorial mutagenesis and selection: the importance of electrostatic catalysis.通过组合诱变和筛选探索分支酸变位酶的活性位点:静电催化的重要性。
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A genetic screen for mutations that increase the thermal stability of phage T4 lysozyme.一项针对可提高噬菌体T4溶菌酶热稳定性的突变的基因筛选。
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