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大鼠丝氨酸:丙酮酸/丙氨酸:乙醛酸氨基转移酶基因的特性鉴定与序列分析

Characterization and sequence analysis of rat serine:pyruvate/alanine:glyoxylate aminotransferase gene.

作者信息

Oda T, Nishiyama K, Ichiyama A

机构信息

Department of Biochemistyr, Hamamatsu University School of Medicine, Japan.

出版信息

Genomics. 1993 Jul;17(1):59-65. doi: 10.1006/geno.1993.1283.

DOI:10.1006/geno.1993.1283
PMID:8406472
Abstract

We have reported the isolation of genomic clones encoding serine:pyruvate aminotransferase (SPT; also named alanine:glyoxylate aminotransferase, AGT) (T. Oda, T. Funai, and A. Ichiyama, 1990, J. Biol. Chem. 265: 7513-7519). These clones contained the entire SPT/AGT gene of 10 kb. In this work, we characterized this gene. The SPT/AGT gene consists of 11 exons, and the exon-intron boundaries have typical splice donor and acceptor sequences. Determination of the nucleotide sequence up to -1.25 kb from the transcription initiation site revealed the presence of many putative cis elements, some of which may explain the transcriptional regulation of the SPT/AGT gene by glucagon and glucocorticoid. The nucleotide sequence around the 5' flanking region of the rat SPT/AGT gene and the whole gene organization were compared with those of the human SPT/AGT gene. No obvious similarities were observed in the 5' flanking region up to -1.25 kb from the initiation site of the gene, but exons 2 to 10 of the rat and human genes have identical sizes and show high similarities.

摘要

我们已报道了编码丝氨酸

丙酮酸转氨酶(SPT;也称为丙氨酸:乙醛酸转氨酶,AGT)的基因组克隆的分离(T. 小田、T. 船井和A. 市山,1990年,《生物化学杂志》265: 7513 - 7519)。这些克隆包含10 kb的完整SPT/AGT基因。在这项工作中,我们对该基因进行了表征。SPT/AGT基因由11个外显子组成,外显子 - 内含子边界具有典型的剪接供体和受体序列。对转录起始位点上游至 -1.25 kb的核苷酸序列的测定揭示了许多推定的顺式元件的存在,其中一些可能解释了胰高血糖素和糖皮质激素对SPT/AGT基因的转录调控。将大鼠SPT/AGT基因5'侧翼区域周围的核苷酸序列和整个基因结构与人类SPT/AGT基因的进行了比较。在基因起始位点上游至 -1.25 kb的5'侧翼区域未观察到明显的相似性,但大鼠和人类基因的外显子2至10大小相同且显示出高度相似性。

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引用本文的文献

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Studies on a unique organelle localization of a liver enzyme, serine:pyruvate (or alanine:glyoxylate) aminotransferase.研究一种肝脏酶——丝氨酸:丙酮酸(或丙氨酸:乙醛酸)氨基转移酶的独特细胞器定位。
Proc Jpn Acad Ser B Phys Biol Sci. 2011;87(5):274-86. doi: 10.2183/pjab.87.274.
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Molecular cloning, expression and characterization of pyridoxamine-pyruvate aminotransferase.吡哆胺-丙酮酸转氨酶的分子克隆、表达及特性分析
Biochem J. 2006 Jun 15;396(3):499-507. doi: 10.1042/BJ20060078.
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Evolution of alanine:glyoxylate aminotransferase intracellular targeting: structural and functional analysis of the guinea pig gene.
丙氨酸:乙醛酸氨基转移酶细胞内靶向的进化:豚鼠基因的结构与功能分析
Biochem J. 1998 Apr 1;331 ( Pt 1)(Pt 1):49-60. doi: 10.1042/bj3310049.