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载脂蛋白B信使核糖核酸编辑与蛋白质在编辑位点的紫外线交联有关。

Apolipoprotein B mRNA editing is associated with UV crosslinking of proteins to the editing site.

作者信息

Navaratnam N, Shah R, Patel D, Fay V, Scott J

机构信息

Medical Research Council Molecular Medicine Group, Royal Postgraduate Medical School, London, United Kingdom.

出版信息

Proc Natl Acad Sci U S A. 1993 Jan 1;90(1):222-6. doi: 10.1073/pnas.90.1.222.

DOI:10.1073/pnas.90.1.222
PMID:8419928
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC45632/
Abstract

Apolipoprotein (apo) B100 mRNA undergoes editing of C-6666 to a U residue, which generates a stop-translation codon and defines the carboxyl terminus of apoB48. To aid purification of the editing enzyme we have undertaken UV crosslinking of a 32P-labeled substrate for apoB mRNA editing in vitro to proteins in an enterocyte editing extract. Proteins of 60 (p60) and 43 (p43) kDa, prominent among crosslinking bands, were competed for by unlabeled substrate, but not by nonspecific RNA, and did not crosslink to antisense RNA. Editing in vitro and UV crosslinking were inhibited by NaCl and vanadyl ribonucleoside complexes and by chemical modification of sulfhydryl, imidazolium, and guanidinium groups on the protein. The editing activity copurified predominantly with p60. To define the binding site for p60 on the substrate RNA, a series of scanning and point mutant RNAs, previously used to define nucleotides 6671-6681 as essential for editing, were used in competition studies with wild-type substrate. Results demonstrated that p60 binding is centered on nucleotides 6671-6674. We suggest that p60 contains the RNA-recognition component of the apoB mRNA-editing enzyme.

摘要

载脂蛋白(apo)B100信使核糖核酸(mRNA)的C-6666位点会被编辑为尿嘧啶(U)残基,这会产生一个终止翻译密码子,并确定apoB48的羧基末端。为了有助于纯化编辑酶,我们在体外对apoB mRNA编辑的32P标记底物与肠细胞编辑提取物中的蛋白质进行了紫外线交联。在交联条带中突出的60 kDa(p60)和43 kDa(p43)蛋白质,可被未标记的底物竞争,但不能被非特异性RNA竞争,并且不会与反义RNA交联。体外编辑和紫外线交联受到氯化钠和钒核糖核苷复合物以及蛋白质上巯基、咪唑鎓和胍基的化学修饰的抑制。编辑活性主要与p60共纯化。为了确定p60在底物RNA上的结合位点,在与野生型底物的竞争研究中使用了一系列先前用于确定6671-6681核苷酸对编辑至关重要的扫描和点突变RNA。结果表明,p60的结合集中在6671-6674核苷酸上。我们认为p60包含apoB mRNA编辑酶的RNA识别成分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/37959318c711/pnas01099-0239-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/2021cbfd7486/pnas01099-0238-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/4743ee2a3226/pnas01099-0238-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/d7391af85e5e/pnas01099-0239-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/37959318c711/pnas01099-0239-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/2021cbfd7486/pnas01099-0238-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/4743ee2a3226/pnas01099-0238-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/d7391af85e5e/pnas01099-0239-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e28/45632/37959318c711/pnas01099-0239-b.jpg

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Science. 1987 Oct 16;238(4825):363-6. doi: 10.1126/science.3659919.
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A novel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine.一种新型的组织特异性RNA加工方式在肠道中产生载脂蛋白B48。
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Thyroid hormone modulates the introduction of a stop codon in rat liver apolipoprotein B messenger RNA.
黑腹果蝇P转座因子通读转录本中的RNA编辑
Genetica. 2010 Dec;138(11-12):1119-26. doi: 10.1007/s10709-010-9499-z. Epub 2010 Oct 1.
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Deficiency in APOBEC2 leads to a shift in muscle fiber type, diminished body mass, and myopathy.APOBEC2 缺乏导致肌纤维类型转变、体重减轻和肌病。
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Nucleolin stabilizes Bcl-X L messenger RNA in response to UVA irradiation.核仁素响应紫外线A照射而稳定Bcl-XL信使核糖核酸。
Cancer Res. 2008 Feb 15;68(4):1046-54. doi: 10.1158/0008-5472.CAN-07-1927.
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Apolipoprotein B mRNA editing. Direct determination of the edited base and occurrence in non-apolipoprotein B-producing cell lines.载脂蛋白B信使核糖核酸编辑。编辑碱基的直接测定及其在不产生载脂蛋白B的细胞系中的出现情况。
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9
Characterization of the apolipoprotein B mRNA editing activity in enterocyte extracts.肠细胞提取物中载脂蛋白B mRNA编辑活性的鉴定
J Biol Chem. 1990 Dec 15;265(35):21401-3.
10
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Nucleic Acids Res. 1990 Oct 11;18(19):5817-21. doi: 10.1093/nar/18.19.5817.