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乙酰胆碱酯酶:静电导向提高配体结合速率。

Acetylcholinesterase: electrostatic steering increases the rate of ligand binding.

作者信息

Tan R C, Truong T N, McCammon J A, Sussman J L

机构信息

Department of Chemistry, University of Houston, Texas 77204-5641.

出版信息

Biochemistry. 1993 Jan 19;32(2):401-3. doi: 10.1021/bi00053a003.

Abstract

Brownian dynamics simulations have been used to calculate the diffusion-controlled rate constants for the binding of a positively charged ligand to several models of acetylcholinesterase (AChE). The crystal structure was used to define the detailed topography and the active sites of the dimeric enzyme. The electric field around AChE was then computed by solving the Poisson equation for different charge distributions in the enzyme at zero ionic strength. These fields were used in turn to calculate the forces on the diffusing ligand. Significant increases in the rate constant resulted in going from a model with no charges to one with the net charges concentrated at the centers of the monomers and then to a model with a realistic distribution of charges throughout the enzyme. The results show that electrostatic steering of ligands contributes to the high rate constants that are observed experimentally for AChE.

摘要

布朗动力学模拟已被用于计算带正电荷配体与几种乙酰胆碱酯酶(AChE)模型结合的扩散控制速率常数。晶体结构用于定义二聚体酶的详细形貌和活性位点。然后通过求解零离子强度下酶中不同电荷分布的泊松方程来计算AChE周围的电场。这些电场依次用于计算扩散配体上的力。速率常数从无电荷模型到净电荷集中在单体中心的模型,再到整个酶中电荷分布符合实际情况的模型,均有显著增加。结果表明,配体的静电导向作用有助于解释实验中观察到的AChE的高反应速率常数。

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