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色氨酸磷光作为酵母磷酸甘油酸激酶溶液结构的监测手段。

Tryptophan phosphorescence as a monitor of the solution structure of phosphoglycerate kinase from yeast.

作者信息

Cioni P, Puntoni A, Strambini G B

机构信息

C.N.R.-Istituto di Biofisica, Pisa, Italy.

出版信息

Biophys Chem. 1993 Feb;46(1):47-55. doi: 10.1016/0301-4622(93)87006-i.

DOI:10.1016/0301-4622(93)87006-i
PMID:8443335
Abstract

The enzyme phosphoglycerate kinase from yeast possesses two tryptophan residues whose phosphorescence spectrum in low-temperature glasses is resolved into two distinct components with 0-0 vibronic bands centered at 408 and 412.5 nm. The thermal profile of the phosphorescence intensity and lifetime shows that the red (longer wavelength) component is quenched in fluid solutions so that the long-lived phosphorescence observed at ambient temperature in buffer is due entirely to the blue (shorter wavelength) component. The remarkable heterogeneity in flexibility of the two chromophores' sites inferred from the thermal behaviour, when analyzed in terms of the crystallographic structure, allows to make a straightforward assignment of the long-lived emission to internal Trp-333. Because in buffer the phosphorescence is due to only one Trp residue the biphasic nature of the decay reveals the presence of stable, slowly interconverting, conformers with profound differences in the internal fluidity of the C-domain. Further, according to the triplet lifetime, complex formation with substrates affect the protein structure in a very selective way. Thus, while 3-phosphoglycerate has practically no influence on the average lifetime, Mg ATP and Mg ADP increases tau by a factor of 1.9 and 5.3, respectively. The change in lifetime implies a remarkable stiffening of the C-domain which is partly relaxed in ternary complexes with 3-phosphoglycerate. These findings are discussed in terms of ligand-induced "closed" conformations of the protein.

摘要

酵母中的磷酸甘油酸激酶含有两个色氨酸残基,其在低温玻璃中的磷光光谱可分解为两个不同的组分,其0-0振动带分别位于408和412.5 nm处。磷光强度和寿命的热谱表明,红色(较长波长)组分在流体溶液中被淬灭,因此在缓冲液中室温下观察到的长寿命磷光完全归因于蓝色(较短波长)组分。根据晶体结构分析,从热行为推断出的两个发色团位点灵活性的显著异质性,使得能够直接将长寿命发射归因于内部的Trp-333。因为在缓冲液中磷光仅由一个色氨酸残基引起,所以衰减的双相性质揭示了存在稳定的、缓慢相互转化的构象异构体,其C结构域的内部流动性存在显著差异。此外,根据三重态寿命,与底物形成复合物以非常有选择性的方式影响蛋白质结构。因此,虽然3-磷酸甘油酸对平均寿命几乎没有影响,但Mg ATP和Mg ADP分别使τ增加1.9倍和5.3倍。寿命的变化意味着C结构域显著变硬,而在与3-磷酸甘油酸形成的三元复合物中部分松弛。这些发现将根据配体诱导的蛋白质“封闭”构象进行讨论。

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PLoS One. 2013 Apr 11;8(4):e60940. doi: 10.1371/journal.pone.0060940. Print 2013.
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Time-resolved room temperature protein phosphorescence: nonexponential decay from single emitting tryptophans.时间分辨室温蛋白质磷光:单个发射色氨酸的非指数衰减。
Biophys J. 1994 Sep;67(3):1192-202. doi: 10.1016/S0006-3495(94)80588-0.