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RNA聚合酶III。基因、因子与转录特异性。

RNA polymerase III. Genes, factors and transcriptional specificity.

作者信息

Willis I M

机构信息

Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461.

出版信息

Eur J Biochem. 1993 Feb 15;212(1):1-11. doi: 10.1111/j.1432-1033.1993.tb17626.x.

DOI:10.1111/j.1432-1033.1993.tb17626.x
PMID:8444147
Abstract

Recent studies on RNA polymerase III (pol III) gene transcription have provided a new awareness of the molecular complexity of this process. Fortunately, while the number of transcription components has been increasing, fundamental similarities have emerged regarding the function of eukaryotic promoter elements and the factors that bind them to form preinitiation complexes. Among these, the ability of transcription factor IIIB (TFIIIB) and pol III to transcribe the Saccharomyces cerevisiae U6 gene suggests that the concept of a minimal pol II promoter comprising a TATA box and an initiator region has a parallel in the pol III system. Furthermore, for each of the three classes of eukaryotic RNA polymerase, the assembly of transcription preinitiation complexes and, to some extent, the nature of these complexes appears to be more similar than was previously anticipated. This work highlights the novel functions and transcriptional properties of newly identified pol III genes, discusses the diversity of pol III promoter structures and presents the notion that the exclusive use of extragenic promoters by some pol III genes (so-called type-3 genes) may have evolved since the divergence of yeast and higher eukaryotes. Additionally, recent progress is reviewed on the identification and cloning of subunits for TFIIIC and TFIIIB. Particular emphasis is given to two components of TFIIIB, the TATA-binding protein and a protein with TFIIB homology (PCF4), since the properties of these molecules suggest a model whereby the polymerase specificity of transcription complexes is determined.

摘要

最近关于RNA聚合酶III(pol III)基因转录的研究,使人们对这一过程的分子复杂性有了新的认识。幸运的是,尽管转录组件的数量不断增加,但在真核启动子元件的功能以及与之结合形成预起始复合物的因子方面,已出现了一些基本的相似之处。其中,转录因子IIIB(TFIIIB)和pol III转录酿酒酵母U6基因的能力表明,由TATA框和起始子区域组成的最小pol II启动子的概念,在pol III系统中也有类似情况。此外,对于真核生物的三类RNA聚合酶中的每一类,转录预起始复合物的组装以及在某种程度上这些复合物的性质,似乎比之前预期的更为相似。这项工作突出了新鉴定的pol III基因的新功能和转录特性,讨论了pol III启动子结构的多样性,并提出了一种观点,即一些pol III基因(所谓的3型基因)对基因外启动子的专一使用,可能自酵母和高等真核生物分化以来就已进化形成。此外,还综述了TFIIIC和TFIIIB亚基鉴定与克隆方面的最新进展。特别强调了TFIIIB的两个组分,即TATA结合蛋白和具有TFIIB同源性的一种蛋白质(PCF4),因为这些分子的特性提示了一种确定转录复合物聚合酶特异性的模型。

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1
RNA polymerase III. Genes, factors and transcriptional specificity.RNA聚合酶III。基因、因子与转录特异性。
Eur J Biochem. 1993 Feb 15;212(1):1-11. doi: 10.1111/j.1432-1033.1993.tb17626.x.
2
The symmetry of the yeast U6 RNA gene's TATA box and the orientation of the TATA-binding protein in yeast TFIIIB.酵母U6 RNA基因TATA框的对称性及酵母TFIIIB中TATA结合蛋白的方向。
Genes Dev. 1995 Dec 1;9(23):2974-85. doi: 10.1101/gad.9.23.2974.
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TFIIIC determines RNA polymerase III specificity at the TATA-containing yeast U6 promoter.TFIIIC决定了含TATA盒的酵母U6启动子处RNA聚合酶III的特异性。
Genes Dev. 1995 Apr 1;9(7):832-42. doi: 10.1101/gad.9.7.832.
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Structure-function analysis of the human TFIIB-related factor II protein reveals an essential role for the C-terminal domain in RNA polymerase III transcription.人类TFIIB相关因子II蛋白的结构-功能分析揭示了C末端结构域在RNA聚合酶III转录中的重要作用。
Mol Cell Biol. 2005 Nov;25(21):9406-18. doi: 10.1128/MCB.25.21.9406-9418.2005.
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TFIIIC-independent in vitro transcription of yeast tRNA genes.酵母tRNA基因的不依赖TFIIIC的体外转录
J Mol Biol. 2000 Jun 9;299(3):601-13. doi: 10.1006/jmbi.2000.3783.
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Different human TFIIIB activities direct RNA polymerase III transcription from TATA-containing and TATA-less promoters.不同的人类TFIIIB活性指导RNA聚合酶III从含TATA和不含TATA的启动子进行转录。
Genes Dev. 2000 Oct 15;14(20):2650-63. doi: 10.1101/gad.836400.
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Widespread use of TATA elements in the core promoters for RNA polymerases III, II, and I in fission yeast.TATA元件在裂殖酵母中RNA聚合酶III、II和I的核心启动子中的广泛应用。
Mol Cell Biol. 2001 Oct;21(20):6870-81. doi: 10.1128/MCB.21.20.6870-6881.2001.
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Comparison of the RNA polymerase III transcription machinery in Schizosaccharomyces pombe, Saccharomyces cerevisiae and human.粟酒裂殖酵母、酿酒酵母和人类中RNA聚合酶III转录机制的比较。
Nucleic Acids Res. 2001 Jul 1;29(13):2675-90. doi: 10.1093/nar/29.13.2675.
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The Brf and TATA-binding protein subunits of the RNA polymerase III transcription factor IIIB mediate position-specific integration of the gypsy-like element, Ty3.RNA聚合酶III转录因子IIIB的Brf和TATA结合蛋白亚基介导了类吉普赛元件Ty3的位置特异性整合。
J Biol Chem. 2000 Sep 22;275(38):29800-7. doi: 10.1074/jbc.M003149200.
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PCF4 encodes an RNA polymerase III transcription factor with homology to TFIIB.PCF4编码一种与TFIIB具有同源性的RNA聚合酶III转录因子。
Cell. 1992 Oct 16;71(2):211-20. doi: 10.1016/0092-8674(92)90350-l.

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