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The application of NMR-pattern-recognition methods to the classification of reduced, peracetylated oligosaccharide residues.

作者信息

Goux W J, Weber D S

机构信息

Department of Chemistry, University of Texas, Dallas, Richardson 75083-0688.

出版信息

Carbohydr Res. 1993 Feb 24;240:57-69. doi: 10.1016/0008-6215(93)84171-2.

Abstract

In the present paper homo- and hetero-nuclear correlation spectroscopies have been used to assign proton and carbonyl carbon resonances of a number of reduced, peracetylated mono- and oligo-saccharide derivatives. Each of the native structures for which assignments were made represent residues or substructures typically found in N- or O-linked glycans. Using the assigned NMR parameters as a basis, residues contained in parent structures were classified according to their residue type and glycosidic substitution sites using a relatively simple K-Nearest Neighbor pattern recognition approach. The method was able to correctly assign 99% of 77 "test residues" to their correct structural class using the full set of 19 assigned parameters as a basis. Similar correlations made between data and structure were less successful when reduced variable sets selected on the basis of SIMCA optimization were used.

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