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小鼠X染色体上Xist周围区域的物理图谱构建及酵母人工染色体(YAC)连续克隆系分析。

Physical mapping and YAC contig analysis of the region surrounding Xist on the mouse X chromosome.

作者信息

Heard E, Simmler M C, Larin Z, Rougeulle C, Courtier B, Lehrach H, Avner P

机构信息

Unité de Génétique Moléculaire Murine, Institut Pasteur, Paris, France.

出版信息

Genomics. 1993 Mar;15(3):559-69. doi: 10.1006/geno.1993.1108.

DOI:10.1006/geno.1993.1108
PMID:8468050
Abstract

The Xist sequence has been proposed as a potential candidate for the X-inactivation center based both on its localization within the candidate region for the X-inactivation center in man and mouse and on its unique pattern of expression from the inactive X chromosome. We have cloned 550 kb of DNA surrounding the mouse Xist sequence in contiguously overlapping YAC clones and have developed a long-range restriction map that spans almost 1 Mb of this region and includes this YAC contig. The detailed restriction map we have established provides a framework for the identification of expressed sequences other than Xist that may equally exhibit unusual expression characteristics associated with X inactivation. The presence of possible structural or methylation differences within this region between the active and inactive X chromosomes has been investigated through comparative analysis of male and female genomic DNA, and we report here the identification of certain CpG-containing restriction sites around Xist that have an interesting differential methylation status on the inactive and active X chromosomes.

摘要

基于Xist序列在人和小鼠X染色体失活中心候选区域内的定位,以及其从不活跃X染色体上独特的表达模式,该序列已被提议作为X染色体失活中心的潜在候选序列。我们在连续重叠的酵母人工染色体(YAC)克隆中克隆了围绕小鼠Xist序列的550 kb DNA,并绘制了一个跨越该区域近1 Mb的长程限制性图谱,其中包括这个YAC重叠群。我们建立的详细限制性图谱为鉴定除Xist之外可能同样表现出与X染色体失活相关的异常表达特征的表达序列提供了一个框架。通过对雄性和雌性基因组DNA的比较分析,研究了该区域内活跃和不活跃X染色体之间可能存在的结构或甲基化差异,我们在此报告在Xist周围鉴定出某些含CpG的限制性位点,它们在不活跃和活跃X染色体上具有有趣的差异甲基化状态。

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Genomics. 1993 Mar;15(3):559-69. doi: 10.1006/geno.1993.1108.
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引用本文的文献

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AFF3-DNA methylation interplay in maintaining the mono-allelic expression pattern of XIST in terminally differentiated cells.AFF3-DNA 甲基化相互作用在维持 XIST 在终末分化细胞中的单等位基因表达模式。
J Mol Cell Biol. 2019 Sep 19;11(9):761-769. doi: 10.1093/jmcb/mjy074.
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Regulation of X-chromosome inactivation by the X-inactivation centre.X 染色体失活中心对 X 染色体失活的调控。
Nat Rev Genet. 2011 Jun;12(6):429-42. doi: 10.1038/nrg2987.
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Functional analysis of the DXPas34 locus, a 3' regulator of Xist expression.DXPas34位点的功能分析,Xist表达的一个3'调控因子。
Mol Cell Biol. 1999 Dec;19(12):8513-25. doi: 10.1128/MCB.19.12.8513.
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Xist yeast artificial chromosome transgenes function as X-inactivation centers only in multicopy arrays and not as single copies.Xist酵母人工染色体转基因仅在多拷贝阵列中作为X染色体失活中心发挥作用,而不是单拷贝形式。
Mol Cell Biol. 1999 Apr;19(4):3156-66. doi: 10.1128/MCB.19.4.3156.
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