Drew H R
CSIRO Division of Biomolecular Engineering, Laboratory for Molecular Biology, North Ryde, NSW, Australia.
J Mol Biol. 1993 Apr 5;230(3):824-36. doi: 10.1006/jmbi.1993.1204.
Two new chromatin-assembly reactions are described. The first involves the addition of phosphorylated HMG-14,17 to the histone octamer plus DNA in high concentrations of salt and yields a repeating particle size or spacing of about 165 base-pairs. The second involves the addition of histone H1 to the acetylated histone octamer plus poly(glutamate) in low concentrations of salt, followed by the addition of DNA; and it yields a spacing of about 170 base-pairs. Plots of band size versus band number in gels, often used to determine nucleosome repeat-length, yield slopes of 138 base-pairs for the histone octamer alone, or 155 base-pairs with HMG-14,17 or 160 base-pairs with histone H1, and intercepts of 10,25 and 20 base-pairs, respectively, in the three cases. Attempts were made to combine the spacing activities of HMG-14,17 and histone H1 within a single assembly reaction, to provide an even longer spacing of about 190 base-pairs (as observed in cell extracts to which H1 has been added), but our present methods did not allow this. The two assembly reactions described here will be of use for structural studies of chromatin having defined length and sequence, and potentially of practical use for the regular, ordered condensation of very long DNA.
本文描述了两种新的染色质组装反应。第一种反应是在高盐浓度下,将磷酸化的HMG-14、17添加到组蛋白八聚体与DNA的混合物中,产生约165个碱基对的重复颗粒大小或间距。第二种反应是在低盐浓度下,先将组蛋白H1添加到乙酰化组蛋白八聚体与聚谷氨酸的混合物中,然后添加DNA;产生约170个碱基对的间距。凝胶中条带大小与条带数量的关系图常用于确定核小体重复长度,单独组蛋白八聚体的斜率为138个碱基对,添加HMG-14、17时为155个碱基对,添加组蛋白H1时为160个碱基对,三种情况下的截距分别为10、25和20个碱基对。我们尝试在单个组装反应中结合HMG-14、17和组蛋白H1的间距活性,以提供约190个碱基对的更长间距(如在添加了H1的细胞提取物中观察到的),但我们目前的方法无法实现。本文描述的这两种组装反应将有助于对具有特定长度和序列的染色质进行结构研究,并可能在非常长的DNA的规则、有序浓缩方面具有实际应用价值。