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人胸苷酸合成酶信使核糖核酸天然反义核糖核酸的克隆与特性分析

Cloning and characterization of a naturally occurring antisense RNA to human thymidylate synthase mRNA.

作者信息

Dolnick B J

机构信息

Department of Experimental Therapeutics, Roswell Park Cancer Institute, Buffalo, NY 14263.

出版信息

Nucleic Acids Res. 1993 Apr 25;21(8):1747-52. doi: 10.1093/nar/21.8.1747.

DOI:10.1093/nar/21.8.1747
PMID:8493092
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC309410/
Abstract

Based upon reverse transcription and polymerase chain reaction results with human KB cell RNA, a cDNA (i.e., 3'rTS1, 1557 nt) with complementarity to thymidylate synthase mRNA was cloned and sequenced. Northern blot analysis showed that 3'rTS1 corresponded to a cytoplasmic 1.8 kb RNA found in several tumor cell lines. The remaining 5'region of this antisense RNA was cloned by a RACE (Rapid Amplification of cDNA Ends) procedure. A full length cDNA (i.e., rTS, 1811 nt) was generated by splicing 3'rTS1 with RACE-generated cDNA. rTS RNA is likely a mRNA that contains four open reading frames. Based upon sequence analysis of the RACE cDNAs and the rTS cDNA, rTS RNA is likely processed from a gene containing at least six introns. Northern blot analysis indicates rTS RNA is expressed in a variety of human tumor cell lines and an aberrant from is expressed in a methotrexate-cell line.

摘要

基于对人KB细胞RNA进行逆转录和聚合酶链反应的结果,克隆并测序了与胸苷酸合成酶mRNA互补的cDNA(即3'rTS1,1557个核苷酸)。Northern印迹分析表明,3'rTS1对应于在几种肿瘤细胞系中发现的一种1.8 kb细胞质RNA。通过RACE(cDNA末端快速扩增)方法克隆了这种反义RNA的其余5'区域。通过将3'rTS1与RACE产生的cDNA拼接,产生了全长cDNA(即rTS,1811个核苷酸)。rTS RNA可能是一种包含四个开放阅读框的mRNA。基于RACE cDNA和rTS cDNA的序列分析,rTS RNA可能是由一个至少包含六个内含子的基因加工而来。Northern印迹分析表明,rTS RNA在多种人肿瘤细胞系中表达,并且在甲氨蝶呤抗性细胞系中表达一种异常形式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab81/309410/b9495a2ac679/nar00057-0071-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab81/309410/17b10e29ffbe/nar00057-0070-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab81/309410/b9495a2ac679/nar00057-0071-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab81/309410/17b10e29ffbe/nar00057-0070-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab81/309410/b9495a2ac679/nar00057-0071-a.jpg

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