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葡萄球菌核酸酶热猝灭重折叠动力学的核磁共振分析

NMR analysis of staphylococcal nuclease thermal quench refolding kinetics.

作者信息

Kautz R A, Fox R O

机构信息

Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06511.

出版信息

Protein Sci. 1993 May;2(5):851-8. doi: 10.1002/pro.5560020514.

DOI:10.1002/pro.5560020514
PMID:8495202
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2142498/
Abstract

Thermally unfolded staphylococcal nuclease has been rapidly quenched to temperatures near 0 degree C and the refolding behavior examined using an NMR kinetic experiment. Unfolded protein, exhibiting random coil chemical shifts, persists following the quench and refolds in two distinct kinetic phases. A protein folding intermediate with a trans Lys 116-Pro 117 peptide bond is transiently overpopulated and relaxes to the predominantly cis native cis-trans equilibrium. The rate of trans-->cis isomerization in the native-like nuclease intermediate is approximately 100-fold faster than that observed in a Lys-Pro model peptide. The activation enthalpy of 20 kcal/mol observed for the nuclease Lys 116-Pro 117 peptide bond is comparable to that observed for other X-Pro isomerizations.

摘要

热变性的葡萄球菌核酸酶已被迅速淬灭至接近0摄氏度的温度,并使用核磁共振动力学实验研究其重折叠行为。淬灭后,呈现无规卷曲化学位移的未折叠蛋白持续存在,并以两个不同的动力学阶段进行重折叠。具有反式赖氨酸116-脯氨酸117肽键的蛋白质折叠中间体短暂地过度富集,并松弛到主要为顺式的天然顺反平衡状态。在类天然核酸酶中间体中,反式→顺式异构化的速率比在赖氨酸-脯氨酸模型肽中观察到的速率快约100倍。核酸酶赖氨酸116-脯氨酸117肽键观察到的20千卡/摩尔的活化焓与其他X-脯氨酸异构化观察到的活化焓相当。

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本文引用的文献

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Stress and strain in staphylococcal nuclease.葡萄球菌核酸酶中的应力与应变
Protein Sci. 1993 May;2(5):838-50. doi: 10.1002/pro.5560020513.
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Effect of proline residues on protein folding.脯氨酸残基对蛋白质折叠的影响。
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Specific intermediates in the folding reactions of small proteins and the mechanism of protein folding.小蛋白质折叠反应中的特定中间体及蛋白质折叠机制。
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Multiple conformations of a protein demonstrated by magnetization transfer NMR spectroscopy.通过磁化转移核磁共振光谱法展示的蛋白质的多种构象。
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Proline isomerism in staphylococcal nuclease characterized by NMR and site-directed mutagenesis.通过核磁共振和定点诱变对葡萄球菌核酸酶中的脯氨酸异构现象进行表征。
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Proline isomerism leads to multiple folded conformations of calbindin D9k: direct evidence from two-dimensional 1H NMR spectroscopy.脯氨酸异构导致钙结合蛋白D9k的多种折叠构象:二维氢核磁共振光谱的直接证据。
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Folding of immunogenic peptide fragments of proteins in water solution. I. Sequence requirements for the formation of a reverse turn.蛋白质免疫原性肽片段在水溶液中的折叠。I. 形成反向转角的序列要求。
J Mol Biol. 1988 May 5;201(1):161-200. doi: 10.1016/0022-2836(88)90446-9.