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蛋白水解正反馈回路的数学分析:延迟时间和酶产量对初始条件及动力学参数的依赖性

Mathematical analysis of a proteolytic positive-feedback loop: dependence of lag time and enzyme yields on the initial conditions and kinetic parameters.

作者信息

Jesty J, Beltrami E, Willems G

机构信息

Department of Medicine, State University of New York, Stony Brook 11794.

出版信息

Biochemistry. 1993 Jun 22;32(24):6266-74. doi: 10.1021/bi00075a021.

DOI:10.1021/bi00075a021
PMID:8512937
Abstract

A model of a proteolytic positive-feedback loop, similar in general terms to feedback loops that occur in blood coagulation and other systems, has been examined by both explicit and numerical analysis. In this loop, modeled as a closed system, each enzyme (E1, E2) catalyzes the formation of the other from its respective zymogen (Z1, Z2), and both enzymes are subject to irreversible inhibition. The system shows three major characteristics. (1) No significant Z1 or Z2 activation occurs unless the combination of initial conditions and kinetic parameters is above a threshold level. This threshold occurs when the product of the enzyme generation rates equals the product of their inhibition rates. When the formation-rate product is less than the inhibition-rate product, there is no response: E1 and E2 generation is minimal and the lag time is effectively infinite. Conversely, when the generation-rate product exceeds the inhibition-rate product, explosive formation of both E1 and E2 is seen. For responses exceeding the threshold, the following obtain. (2) The lag time in E1 and E2 generation is a highly nonlinear function of the zymogen concentrations and the enzyme generation and inhibition rates. In contrast, there is a simple logarithmic relationship between the lag time and the initial trace concentration of the enzyme that is responsible for initiating the system; in this model, E1. (3) The extent of Z1 and Z2 activation is similarly a nonlinear function of the conditions and parameters but is independent of the initiating trace level of E1.(ABSTRACT TRUNCATED AT 250 WORDS)

摘要

一个蛋白水解正反馈回路模型,总体上类似于血液凝固及其他系统中出现的反馈回路,已通过显式分析和数值分析进行了研究。在这个被建模为封闭系统的回路中,每种酶(E1、E2)催化各自的酶原(Z1、Z2)形成另一种酶,并且两种酶都受到不可逆抑制。该系统呈现出三个主要特征。(1)除非初始条件和动力学参数的组合高于阈值水平,否则不会发生显著的Z1或Z2激活。当酶生成速率的乘积等于其抑制速率的乘积时,这个阈值就会出现。当生成速率乘积小于抑制速率乘积时,没有反应:E1和E2的生成极少,滞后时间实际上是无限的。相反,当生成速率乘积超过抑制速率乘积时,会看到E1和E2的爆发性形成。对于超过阈值的反应,有以下情况。(2)E1和E2生成的滞后时间是酶原浓度以及酶生成和抑制速率的高度非线性函数。相比之下,滞后时间与负责启动系统的酶的初始微量浓度之间存在简单的对数关系;在这个模型中是E1。(3)Z1和Z2激活的程度同样是条件和参数的非线性函数,但与E1的起始微量水平无关。(摘要截断于250字)

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