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人类内源性逆转录病毒元件K10(HERV-K10):通过体细胞杂交定位和荧光原位杂交进行染色体定位

Human endogenous retroviral element k10 (HERV-K10): chromosomal localization by somatic hybrid mapping and fluorescence in situ hybridization.

作者信息

Meese E, Göttert E, Zang K D, Sauter M, Schommer S, Mueller-Lantzsch N

机构信息

Institut für Humangenetik, Universitätskliniken des Saarlandes, Homburg/Saar, Germany.

出版信息

Cytogenet Cell Genet. 1996;72(1):40-2. doi: 10.1159/000134157.

DOI:10.1159/000134157
PMID:8565630
Abstract

The human endogenous retrovirus K10 (HERV-K10) was mapped to human chromosomes using HERV-K10 specific PCR primers on a somatic hybrid mapping panel. A non-random chromosomal location was demonstrated with PCR signals on chromosomes 1, 3, 4, 5, 6, 7, 10, 11, 12, 14, 15, 19, 20, 21, 22 and Y. There was a lack of PCR products on the other chromosomes, even after hybridization with a HERV-K10 specific probe. To further localize the HERV-K10 sequence we used fluorescence in situ hybridization. Chromosomes 1, 3, 6, 7, 10, 11, 12 and 22 were found to contain several HERV-K10 sequences in different regions. The presence of several integration sites on some chromosomes is consistent with previous studies demonstrating 30-50 copies of the HERV-K10 sequence per haploid genome. The mapping information reported in this study will assist the analysis of the biological significance of the HERV-K10 sequence.

摘要

利用人内源性逆转录病毒K10(HERV-K10)特异性PCR引物,在体细胞杂种定位板上对HERV-K10进行人染色体定位。在1、3、4、5、6、7、10、11、12、14、15、19、20、21、22号染色体和Y染色体上通过PCR信号证明了其非随机染色体定位。即使与HERV-K10特异性探针杂交后,在其他染色体上仍未检测到PCR产物。为了进一步定位HERV-K10序列,我们采用了荧光原位杂交技术。发现1、3、6、7、10、11、12和22号染色体在不同区域含有多个HERV-K10序列。一些染色体上存在多个整合位点,这与先前研究表明单倍体基因组中存在30 - 50个HERV-K10序列拷贝的结果一致。本研究报告的定位信息将有助于分析HERV-K10序列的生物学意义。

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Proviral structure, chromosomal location, and expression of HERV-K-T47D, a novel human endogenous retrovirus derived from T47D particles.源自T47D颗粒的新型人类内源性逆转录病毒HERV-K-T47D的前病毒结构、染色体定位及表达
J Virol. 1998 Oct;72(10):8384-91. doi: 10.1128/JVI.72.10.8384-8391.1998.
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Human endogenous retrovirus K homologous sequences and their coding capacity in Old World primates.
旧世界灵长类动物中的人类内源性逆转录病毒K同源序列及其编码能力。
J Virol. 1998 Mar;72(3):1870-5. doi: 10.1128/JVI.72.3.1870-1875.1998.
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Expressed sequences within pericentromeric heterochromatin of human chromosome 22.
Mamm Genome. 1997;8(11):859-62. doi: 10.1007/s003359900595.
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The viruses in all of us: characteristics and biological significance of human endogenous retrovirus sequences.我们体内的病毒:人类内源性逆转录病毒序列的特征及生物学意义
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