Davydov R, Sahlin M, Kuprin S, Gräslund A, Ehrenberg A
Department of Biophysics, Stockholm University, Sweden.
Biochemistry. 1996 Apr 30;35(17):5571-6. doi: 10.1021/bi952836y.
It was recently shown by EPR that high yields of a sterically constrained mixed-valent species may be formed in radical free protein metR2 of Escherichia coli ribonucleotide reductase by gamma-irradiation at 77 K [Davydov, R., Kuprin, S., Gräslund, A., & Ehrenberg, A. (1994) J. Am. Chem. Soc. 116, 11120]. This species, with S = 1/2, essentially retains the ligand geometry of the original diferric center and should be a sensitive probe for structural changes in the diferric centers. Here we apply this probe and demonstrate that there is a structural difference between the diferric iron center of the complete site of protein R2, with a tyrosyl radical, and that of metR2, without radical. The EPR spectrum of the mixed-valent species of metR2 shows pure axial symmetry, while complete sites show rhombic distortion and a shifted high-field turning point. Differences also remain in the EPR of the first S = 9/2 species obtained by annealing at 165 K, but disappear after relaxation at 200 K. In addition, the diferric center of a complete site is not reduced radiolytically until the associated tyrosyl radical has been reduced, indicating that an electron first reaching the iron center may be transferred to the radical. This route of electron transfer and the influence of the radical on the structure of the iron center are likely to have functional roles for the formation of the proposed substrate radical and regulation of redox processes within the enzyme. The sensitivity of the structure of the iron site to the structure of the Tyr-122 site is also demonstrated by the strong influence the mutation Y122F has on the EPR spectra of the corresponding mixed-valent species.
最近电子顺磁共振(EPR)研究表明,在77 K下对大肠杆菌核糖核苷酸还原酶的无自由基蛋白metR2进行γ辐照,可形成高产率的空间受限混合价态物种[达维多夫,R.,库普林,S.,格拉斯隆德,A.,&埃伦贝格,A.(1994)《美国化学会志》116,11120]。这个S = 1/2的物种基本上保留了原始双铁中心的配体几何结构,应该是双铁中心结构变化的灵敏探针。在此我们应用这个探针,证明了具有酪氨酸自由基的完整R2蛋白位点的双铁中心与无自由基的metR2的双铁中心在结构上存在差异。metR2混合价态物种的EPR谱显示出纯轴向对称性,而完整位点显示出菱形畸变和高场转折点的位移。在165 K退火得到的第一个S = 9/2物种的EPR中也存在差异,但在200 K弛豫后消失。此外,完整位点的双铁中心在相关酪氨酸自由基被还原之前不会被辐射还原,这表明首先到达铁中心的电子可能会转移到自由基上。这种电子转移途径以及自由基对铁中心结构的影响可能在酶中底物自由基的形成和氧化还原过程的调节中发挥功能作用。铁位点结构对Tyr - 122位点结构的敏感性也通过Y122F突变对相应混合价态物种的EPR谱的强烈影响得到证明。