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盘基网柄菌肌球蛋白J重链基因的序列预测出一种新型的二聚体非常规肌球蛋白,其重链分子量为258 kDa。

The sequence of the dictyostelium myo J heavy chain gene predicts a novel, dimeric, unconventional myosin with a heavy chain molecular mass of 258 kDa.

作者信息

Hammer J A, Jung G

机构信息

Laboratory of Cell Biology, Section on Molecular Cell Biology, NHLBI, National Institutes of Health, Bethesda, Maryland 20892-0301, USA.

出版信息

J Biol Chem. 1996 Mar 22;271(12):7120-7. doi: 10.1074/jbc.271.12.7120.

DOI:10.1074/jbc.271.12.7120
PMID:8636147
Abstract

The complete sequence of the Dictyostelium myo J heavy chain gene has been determined from overlapping genomic clones. The gene spans approximately 7400 base pairs, is split by two small introns, and encodes a 2241-residue, 258-kDa heavy chain polypeptide that that is composed of an N-terminal 944-residue myosin head domain, a central 863-residue domain that is predicted to form an alpha helical coiled-coil containing six hinges, and a C-terminal 434-residue globular domain. The head domain is notable in that it contains a approximately 30 residue insert near the nucleotide binding pocket, and five potential calmodulin/myosin light chain binding sites at the head/tail junction. The existence within the Myo J tail domain of both an extensive coiled-coil structure and a large globular domain suggests that this myosin is dimeric and incapable of self-assembly into filaments. While these properties, as well as the overall predicted structure of the Myo J protein, are reminiscent of class V myosins, the sequence of the 434-residue globular tail piece of Myo J shows no similarity to that of either yeast or vertebrate myosins V. Consistent with this, phylogenetic analyses based on myosin head sequence comparisons do not classify Myo J as a type V myosin. These and other sequence comparisons indicate that Myo J and two as-yet-unclassified unconventional myosins from Arabidopsis represent members of the newest class within the myosin superfamily (class XI). Northern blots analyses suggest that Myo J may function predominantly in vegetative Dictyostelium cells. Finally, Southern blot analyses suggest that Dictyostelium possesses another myosin that is very closely related to Myo J.

摘要

通过重叠的基因组克隆已确定了盘基网柄菌肌球蛋白J重链基因的完整序列。该基因跨度约7400个碱基对,被两个小内含子隔开,编码一个由2241个氨基酸残基组成、分子量为258 kDa的重链多肽,该多肽由一个N端944个氨基酸残基的肌球蛋白头部结构域、一个中央863个氨基酸残基的结构域(预计形成一个包含六个铰链的α螺旋卷曲螺旋)和一个C端434个氨基酸残基的球状结构域组成。头部结构域的显著特点是在核苷酸结合口袋附近有一个约30个氨基酸残基的插入片段,并且在头部/尾部交界处有五个潜在的钙调蛋白/肌球蛋白轻链结合位点。肌球蛋白J尾部结构域中存在广泛的卷曲螺旋结构和大的球状结构域,这表明这种肌球蛋白是二聚体,无法自组装成细丝。虽然这些特性以及肌球蛋白J蛋白的整体预测结构让人联想到V类肌球蛋白,但肌球蛋白J的434个氨基酸残基的球状尾部片段的序列与酵母或脊椎动物的V类肌球蛋白均无相似性。与此一致的是,基于肌球蛋白头部序列比较的系统发育分析并未将肌球蛋白J归类为V类肌球蛋白。这些以及其他序列比较表明,肌球蛋白J和拟南芥中另外两种尚未分类的非常规肌球蛋白代表了肌球蛋白超家族中最新类别的成员(XI类)。Northern印迹分析表明,肌球蛋白J可能主要在盘基网柄菌的营养细胞中发挥作用。最后,Southern印迹分析表明,盘基网柄菌还拥有另一种与肌球蛋白J非常密切相关的肌球蛋白。

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