Christoffersen M, Bolvig S, Tüchsen E
Roskilde University, Institute of Life Sciences and Chemistry, Denmark.
Biochemistry. 1996 Feb 20;35(7):2309-15. doi: 10.1021/bi951711q.
Peptide hydrogen exchange is measured in bovine pancreatic trypsin inhibitor (BPTI) by 2D NMR in KCl solutions varying between 0.02 and 0.43 M. The effects of salt are analyzed for 16 assigned peptide groups located near the protein-solvent interface in the crystal structure. Salt effects are obtained for exchange by H+ and OH- catalysis, at pH 2.3 and 5.3, respectively. Semilogarithmic plots of rate constants vs the square root of the ionic strengths are virtually linear. The salt effects, taken as the slopes of these plots, vary both in size and sign for each catalytic process, reflecting the variation of local electrostatic field at the exchanging site. The effects are correlated with electrostatic potentials calculated by the finite differences method, taking into account both ionic and dipolar charges in the static structure. This suggests that the transition complexes between the catalyst and the protein are formed with the protein structure very similar to the crystal structure.
通过二维核磁共振(2D NMR)在0.02至0.43 M之间变化的KCl溶液中测量牛胰蛋白酶抑制剂(BPTI)中的肽氢交换。分析了盐对晶体结构中位于蛋白质-溶剂界面附近的16个指定肽基团的影响。分别在pH 2.3和5.3下获得了H⁺和OH⁻催化交换的盐效应。速率常数对离子强度平方根的半对数图实际上是线性的。作为这些图的斜率的盐效应,对于每个催化过程,在大小和符号上都有所不同,反映了交换位点处局部静电场的变化。考虑到静态结构中的离子电荷和偶极电荷,这些效应与通过有限差分法计算的静电势相关。这表明催化剂与蛋白质之间的过渡复合物是在与晶体结构非常相似的蛋白质结构中形成的。