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变形链球菌英布里特(Ingbritt)编码细胞外葡聚糖酶的dexA基因的序列分析。

Sequence analysis of the Streptococcus mutans Ingbritt dexA gene encoding extracellular dextranase.

作者信息

Igarashi T, Yamamoto A, Goto N

机构信息

Department of Oral Microbiology, Showa University School of Dentistry, Tokyo, Japan.

出版信息

Microbiol Immunol. 1995;39(11):853-60. doi: 10.1111/j.1348-0421.1995.tb03282.x.

Abstract

The complete nucleotide sequence (3,747 bp) of the dextranase gene (dexA) and flanking regions of the chromosome of Streptococcus mutans Ingbritt (serotype c) were determined. The open reading frame for dexA was 2,550 bp, ending with a stop codon TGA. A putative ribosome-binding site, promoter preceding the start codon, and potential stem-loop structure were identified. The presumed dextranase protein (DexA) consisting of 850 amino acids was estimated to have a molecular size of 94,536 Da and a pI of 4.79. The nucleotide sequence and the deduced amino acid sequences of S. mutans dexA exhibited homologies of 57.8% and 47.0%, respectively, to those of Streptococcus sobrinus dex. The homologous region of dex of S. sobrinus was in the N-terminal half. The C terminus of DexA consisted of a hexapeptide LPQTGD, followed by 7 charged amino acids, 21 amino acids with a strongly hydrophobic character, and a charged hexapeptide tail, which have been reported as a common structure of C termini of not only the surface-associated proteins of Gram-positive cocci but also the extracellular enzymes such as beta-fructosidase of S. mutans and dextranase of S. sobrinus. The DexA protein had no significant homology with the glucosyltransferases, the glucan-binding protein, or the dextranase inhibitor of mutans streptococci.

摘要

测定了变形链球菌英布里特株(血清型c)染色体上葡聚糖酶基因(dexA)及其侧翼区域的完整核苷酸序列(3747 bp)。dexA的开放阅读框为2550 bp,以终止密码子TGA结束。鉴定出一个推定的核糖体结合位点、起始密码子之前的启动子以及潜在的茎环结构。推测的由850个氨基酸组成的葡聚糖酶蛋白(DexA)的分子大小估计为94536 Da,pI为4.79。变形链球菌dexA的核苷酸序列和推导的氨基酸序列与远缘链球菌dex的核苷酸序列和推导的氨基酸序列的同源性分别为57.8%和47.0%。远缘链球菌dex的同源区域在N端的一半。DexA的C末端由一个六肽LPQTGD组成,接着是7个带电荷的氨基酸、21个具有强疏水性的氨基酸以及一个带电荷的六肽尾巴,这些结构不仅是革兰氏阳性球菌表面相关蛋白的C末端常见结构,也是变形链球菌的β-果糖苷酶和远缘链球菌的葡聚糖酶等细胞外酶的C末端常见结构。DexA蛋白与变形链球菌的葡糖基转移酶、葡聚糖结合蛋白或葡聚糖酶抑制剂没有显著同源性。

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