Varadaraj K, Kumari S S, Skinner D M
Biology Division, Oak Ridge National Laboratory, TN 37831, USA.
Gene. 1996 Jun 1;171(2):177-84. doi: 10.1016/0378-1119(96)00018-2.
Two actin-encoding cDNAs (act1 and act2) from Gecarcinus lateralis have been sequenced or partially sequenced and the corresponding proteins deduced. The act1 cDNA has a complete ORF; the act2 cDNA lacks most of the 5' end of the coding region. The nucleotide (nt) sequences of both clones are very similar to act sequences of many organisms, the most closely related being from another arthropod, the silkmoth Bombyx mori. The proteins Act1 and Act2 are more similar to vertebrate cytoplasmic actin isoforms (beta-actins) than to vertebrate muscle actins (alpha-actins); they are also more similar to animal actins than to those of fungi or plants. Codon usage is strongly biased toward C or G in the third position. The deduced number of amino acid (aa) residues and calculated Mr for Act1 are 376 aa and 41.94 kDa, respectively. The deduced aa sequence of Act1 is very similar to those of muscle actins of B. mori and Drosophila melanogaster. Southern blots indicated seven to eleven act genes in the crab genome. Northern blots probed with a segment from the 3' UTR of act1 showed a single band of approx. 1.6 kb in poly(A)+ mRNAs from epidermis, limb bud or claw muscle and in total RNAs from ovary and gill, and two bands of approx. 1.6 and 1.8 kb in total RNA from midgut gland. Western blots of one-dimensional gels of proteins from the four layers of the exoskeleton, epidermis, limb buds and claw muscle were probed with a monoclonal Ab against chicken gizzard actin; tissue- and stage-specific changes in actin content were observed. The presence of several isoforms, and differences in their number and occurrence at various stages of the intermolt cycle, were detected on Western blots of two-dimensional gels.
已对来自侧方地蟹(Gecarcinus lateralis)的两个肌动蛋白编码cDNA(act1和act2)进行了测序或部分测序,并推导了相应的蛋白质。act1 cDNA具有完整的开放阅读框;act2 cDNA缺少编码区5'端的大部分。两个克隆的核苷酸(nt)序列与许多生物的肌动蛋白序列非常相似,关系最密切的来自另一种节肢动物家蚕(Bombyx mori)。蛋白质Act1和Act2与脊椎动物细胞质肌动蛋白同工型(β-肌动蛋白)的相似性高于与脊椎动物肌肉肌动蛋白(α-肌动蛋白)的相似性;它们与动物肌动蛋白的相似性也高于与真菌或植物肌动蛋白的相似性。密码子使用在第三位强烈偏向于C或G。推导的Act1氨基酸(aa)残基数和计算的Mr分别为376个aa和41.94 kDa。Act1推导的aa序列与家蚕和黑腹果蝇(Drosophila melanogaster)的肌肉肌动蛋白序列非常相似。Southern印迹表明蟹基因组中有7至11个肌动蛋白基因。用act1的3'UTR片段进行Northern印迹分析,在表皮、肢芽或爪肌的poly(A)+ mRNA以及卵巢和鳃的总RNA中显示出一条约1.6 kb的单带,而在中肠腺的总RNA中显示出两条约为1.6和1.8 kb的带。用抗鸡砂囊肌动蛋白的单克隆抗体对来自外骨骼、表皮、肢芽和爪肌四层的蛋白质进行一维凝胶的Western印迹分析,观察到肌动蛋白含量的组织和阶段特异性变化。在二维凝胶的Western印迹上检测到几种同工型的存在,以及它们在蜕皮间期不同阶段的数量和出现情况的差异。