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位于人类22号染色体长臂1区1带位置的一个异常的免疫球蛋白λ样基因的复合外显子结构。

Composite exon structure of an unusual Ig lambda-like gene located at human 22q11 position.

作者信息

Schiff C, Milili M, Zucman-Rossi J, Djabali M, Fougereau M

机构信息

Centre d'Immunologie de Marseille Luminy (CIML), Case 906, 13288 Marseille Cedex 09 France.

出版信息

Mamm Genome. 1996 Aug;7(8):598-602. doi: 10.1007/s003359900177.

DOI:10.1007/s003359900177
PMID:8678981
Abstract

The surrogate light chain, composed of the VpreB and the lambda-like proteins, plays a critical role in controlling the early stages of B lymphocyte development. The lambda-like locus, located on the q11. 2-q11.3 region of human Chromosome (Chr) 22, contains three genes (14.1 Flambda-1, and 16.1) among which only the 14.1 is functional. This gene contains three exons, whereas the others lack exon 1. We have isolated in fetal liver a transcript of the Flambda-1 gene that contains the exon 3 sequence and a long non-Ig related sequence upstream. We show that this sequence resulted from the splicing of three new exons located telomeric to the Flambda-1 gene, highly homologous to beta-glucuronidase exon 11 (Chr 7), to the ABR exon 8 (Chr 17), and to an Expressed Sequence Tag (EST), respectively. We also show that this chimeric transcript is expressed in cells or tissues from various origins. This composite gene structure appears to be a new example of human genome flexibility, which can be explained by mechanisms such as exon shuffling and which results in the emergence of new transcription units inserted in regions involved in translocations.

摘要

替代轻链由VpreB和类λ蛋白组成,在控制B淋巴细胞发育的早期阶段发挥关键作用。类λ基因座位于人类22号染色体(Chr)的q11.2 - q11.3区域,包含三个基因(14.1、Flambda - 1和16.1),其中只有14.1具有功能。该基因包含三个外显子,而其他基因缺乏外显子1。我们在胎儿肝脏中分离出了Flambda - 1基因的一个转录本,它包含外显子3序列以及上游一段长的非免疫球蛋白相关序列。我们发现该序列是由位于Flambda - 1基因端粒侧的三个新外显子剪接而成,它们分别与β - 葡萄糖醛酸酶外显子11(7号染色体)、ABR外显子8(17号染色体)和一个表达序列标签(EST)高度同源。我们还发现这种嵌合转录本在各种来源的细胞或组织中都有表达。这种复合基因结构似乎是人类基因组灵活性的一个新例子,这可以通过外显子洗牌等机制来解释,其结果是在涉及易位的区域出现了新插入的转录单元。

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Composite exon structure of an unusual Ig lambda-like gene located at human 22q11 position.位于人类22号染色体长臂1区1带位置的一个异常的免疫球蛋白λ样基因的复合外显子结构。
Mamm Genome. 1996 Aug;7(8):598-602. doi: 10.1007/s003359900177.
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本文引用的文献

1
Physical location of the human immunoglobulin lambda-like genes, 14.1, 16.1, and 16.2.人类免疫球蛋白λ样基因的物理位置,14.1、16.1和16.2。
Immunogenetics. 1993;38(6):387-99. doi: 10.1007/BF00184519.
2
Human FLT3/FLK2 gene: cDNA cloning and expression in hematopoietic cells.
Blood. 1993 Aug 15;82(4):1110-9.
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Multi-level regulation of lysosomal gene expression in lymphocytes.
Biochem Biophys Res Commun. 1993 Aug 31;195(1):327-35. doi: 10.1006/bbrc.1993.2048.
4
Human ABR encodes a protein with GAPrac activity and homology to the DBL nucleotide exchange factor domain.
人类ABR编码一种具有GAPrac活性且与DBL核苷酸交换因子结构域具有同源性的蛋白质。
J Biol Chem. 1993 Aug 15;268(23):16903-6.
5
A complex of glycoproteins is associated with VpreB/lambda 5 surrogate light chain on the surface of mu heavy chain-negative early precursor B cell lines.一种糖蛋白复合物与μ重链阴性早期前体B细胞系表面的VpreB/λ5替代轻链相关联。
J Exp Med. 1993 Aug 1;178(2):469-78. doi: 10.1084/jem.178.2.469.
6
Structure, biosynthesis, and transduction properties of the human mu-psi L complex: similar behavior of preB and intermediate preB-B cells in transducing ability.人μ-ψL复合体的结构、生物合成及转导特性:前B细胞和中间前B-B细胞在转导能力方面的相似行为
Int Immunol. 1993 May;5(5):467-78. doi: 10.1093/intimm/5.5.467.
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A novel cDNA detects homozygous microdeletions in greater than 50% of type I spinal muscular atrophy patients.
Nat Genet. 1995 Jan;9(1):56-62. doi: 10.1038/ng0195-56.
8
Mutational analysis of a patient with mucopolysaccharidosis type VII, and identification of pseudogenes.黏多糖贮积症VII型患者的突变分析及假基因的鉴定。
Am J Hum Genet. 1993 Mar;52(3):517-26.
9
Sequence and analysis of the human ABL gene, the BCR gene, and regions involved in the Philadelphia chromosomal translocation.人类ABL基因、BCR基因以及参与费城染色体易位的区域的序列与分析。
Genomics. 1995 May 1;27(1):67-82. doi: 10.1006/geno.1995.1008.
10
Physical mapping of 30 CA repeats on human chromosome 22.
Genomics. 1995 May 20;27(2):345-7. doi: 10.1006/geno.1995.1053.