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甘氨酰胺核糖核苷酸转甲酰基酶活性位点突变体的快速筛选

A rapid screen of active site mutants in glycinamide ribonucleotide transformylase.

作者信息

Warren M S, Marolewski A E, Benkovic S J

机构信息

Department of Chemistry, Davey Laboratory, Pennsylvania State University, University park 16802, USA.

出版信息

Biochemistry. 1996 Jul 9;35(27):8855-62. doi: 10.1021/bi9528715.

Abstract

Specific and saturation site-directed mutageneses have been used to alter each polar residue within 6 A of the catalytic center of glycinamide ribonucleotide transformylase (EC 2.1.2.2). These mutants were rapidly screened for catalytic activity using functional complementation of auxotrophic cells. This screen allows a rapid qualitative estimate of enzyme activity for each of these mutants. These results have shown that none of the polar residues close to the catalytic center of the enzyme are irreplaceable, although several are important for full catalytic activity, namely, Asn106, His108, Ser135, and Asp144. A mechanism is proposed in which a fixed water molecule mediates the required proton transfers between substrate and cofactor, while the formyl group is transferred from 10-formyltetrahydrofolate by direct nucleophilic attack by the amine of glycinamide ribonucleotide. The active site polar residues may act to alter the pKa values of the attacking and leaving amino groups within a putative tetrahedral intermediate in order to facilitate the transfer of the formyl group.

摘要

特异性和饱和定点诱变已被用于改变甘氨酰胺核苷酸转甲酰基酶(EC 2.1.2.2)催化中心6埃范围内的每个极性残基。利用营养缺陷型细胞的功能互补对这些突变体进行了催化活性的快速筛选。该筛选方法能够对每个突变体的酶活性进行快速定性评估。这些结果表明,尽管有几个极性残基对完全催化活性很重要,即Asn106、His108、Ser135和Asp144,但靠近酶催化中心的极性残基没有一个是不可替代的。本文提出了一种机制,其中一个固定的水分子介导底物与辅因子之间所需的质子转移,而甲酰基则通过甘氨酰胺核苷酸的胺直接亲核攻击从10-甲酰四氢叶酸转移。活性位点的极性残基可能会改变假定四面体中间体中进攻和离去氨基的pKa值,以促进甲酰基的转移。

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