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功能性小鼠基因组XPG基因的分子克隆与结构分析

Molecular cloning and structural analysis of the functional mouse genomic XPG gene.

作者信息

Ludwig D L, Mudgett J S, Park M S, Perez-Castro A V, MacInnes M A

机构信息

Life Sciences Division, MS M888, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA.

出版信息

Mamm Genome. 1996 Sep;7(9):644-9. doi: 10.1007/s003359900198.

DOI:10.1007/s003359900198
PMID:8703115
Abstract

The mouse XPG gene is a homolog of the human DNA excision repair gene known to be defective in the hereditary sun-sensitive disorder xeroderma pigmentosum (group-G). Defects in mouse XPG have been shown to directly affect the sensitivity of cultured cells to chemotherapy agents and may play a role in tumor cell drug resistance in vivo. A full-length cosmid clone of mouse XPG was isolated by complementation of the UV sensitivity and repair defect in CHO-UV135 cells. Exon mapping determined that the gene consisted of 15 exons within 32 kb of genomic DNA. Sequencing of intron-exon boundaries revealed that mouse XPG possesses a rare class of intron previously identified in only four other eukaryotic genes; it utilizes AT and AC dinucleotides instead of the expected GT and AG within the splice junctions. Promoter analysis determined that mouse XPG is expressed constitutively and probably initiates transcription from multiple start sites, yet, unlike the yeast homolog RAD2, we found no evidence that it is UVC inducible in cultured cells. Amino acid comparison with human XPG identified a highly conserved acidic region of homology not previously described.

摘要

小鼠XPG基因是人类DNA切除修复基因的同源物,已知该基因在遗传性日光敏感疾病色素性干皮病(G组)中存在缺陷。已表明小鼠XPG基因的缺陷会直接影响培养细胞对化疗药物的敏感性,并可能在体内肿瘤细胞的耐药性中起作用。通过补充CHO-UV135细胞中的紫外线敏感性和修复缺陷,分离出了小鼠XPG的全长黏粒克隆。外显子定位确定该基因由基因组DNA 32 kb内的15个外显子组成。内含子-外显子边界的测序表明,小鼠XPG具有一类罕见的内含子,此前仅在其他四个真核基因中鉴定到;它在剪接连接处使用AT和AC二核苷酸,而不是预期的GT和AG。启动子分析确定小鼠XPG基因组成型表达,可能从多个起始位点启动转录,然而,与酵母同源物RAD2不同,我们没有发现它在培养细胞中被UVC诱导的证据。与人类XPG的氨基酸比较确定了一个以前未描述的高度保守的同源酸性区域。

相似文献

1
Molecular cloning and structural analysis of the functional mouse genomic XPG gene.功能性小鼠基因组XPG基因的分子克隆与结构分析
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2
ERCC4 (XPF) encodes a human nucleotide excision repair protein with eukaryotic recombination homologs.ERCC4(XPF)编码一种具有真核生物重组同源物的人类核苷酸切除修复蛋白。
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Human ERCC5 cDNA-cosmid complementation for excision repair and bipartite amino acid domains conserved with RAD proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe.人ERCC5 cDNA - 黏粒互补用于切除修复以及与酿酒酵母和粟酒裂殖酵母的RAD蛋白保守的双部分氨基酸结构域。
Mol Cell Biol. 1993 Oct;13(10):6393-402. doi: 10.1128/mcb.13.10.6393-6402.1993.
4
Mutations that disable the DNA repair gene XPG in a xeroderma pigmentosum group G patient.在一名着色性干皮病G组患者中使DNA修复基因XPG失活的突变。
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The founding members of xeroderma pigmentosum group G produce XPG protein with severely impaired endonuclease activity.着色性干皮病G组的创始成员产生的XPG蛋白具有严重受损的核酸内切酶活性。
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Sequence analysis of the ERCC2 gene regions in human, mouse, and hamster reveals three linked genes.对人类、小鼠和仓鼠的ERCC2基因区域进行序列分析,发现了三个连锁基因。
Genomics. 1996 Jun 15;34(3):399-409. doi: 10.1006/geno.1996.0303.

引用本文的文献

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Deficiency in the nuclease activity of xeroderma pigmentosum G in mice leads to hypersensitivity to UV irradiation.小鼠中着色性干皮病G核酸酶活性的缺乏导致对紫外线照射的超敏反应。
Mol Cell Biol. 2004 Mar;24(6):2237-42. doi: 10.1128/MCB.24.6.2237-2242.2004.
2
The human XPG gene: gene architecture, alternative splicing and single nucleotide polymorphisms.人类XPG基因:基因结构、可变剪接及单核苷酸多态性
Nucleic Acids Res. 2001 Apr 1;29(7):1443-52. doi: 10.1093/nar/29.7.1443.
3
AT-AC pre-mRNA splicing mechanisms and conservation of minor introns in voltage-gated ion channel genes.

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Multiple nuclear localization signals in XPG nuclease.XPG核酸酶中的多个核定位信号。
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Evolutionary conservation of excision repair in Schizosaccharomyces pombe: evidence for a family of sequences related to the Saccharomyces cerevisiae RAD2 gene.粟酒裂殖酵母中切除修复的进化保守性:与酿酒酵母RAD2基因相关的一个序列家族的证据。
Nucleic Acids Res. 1993 Mar 25;21(6):1345-9. doi: 10.1093/nar/21.6.1345.
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Human ERCC5 cDNA-cosmid complementation for excision repair and bipartite amino acid domains conserved with RAD proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe.人ERCC5 cDNA - 黏粒互补用于切除修复以及与酿酒酵母和粟酒裂殖酵母的RAD蛋白保守的双部分氨基酸结构域。
Mol Cell Biol. 1993 Oct;13(10):6393-402. doi: 10.1128/mcb.13.10.6393-6402.1993.
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Xeroderma pigmentosum complementation group G associated with Cockayne syndrome.与科凯恩综合征相关的着色性干皮病互补组G
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