Allenspach K, Amacker M, Leutenegger C M, Hottiger M, Hofmann-Lehmann R, Hübscher U, Pistello M, Lutz H
Veterinär-Medizinisches Labor, Departement für Innere Veterinärmedizin, Universität Zürich.
Schweiz Arch Tierheilkd. 1996;138(2):87-92.
Quantification of provirus copies is important in the context of different biological questions. The most reliable approach for DNA quantification is a PCR based on coamplification of two templates of similar length, the target sequence and the reference template, sharing the same primer recognition sequences. During the amplification, the two templates compete for the same primer set (competitive PCR, or cPCR) AND consequently amplify at the same rate independently of the number of cycles. The amplified products can be distingushed by their different lengths. After densitometrical analysis, the proviral copy number of experimentally feline immunodeficiency virus infected cats could be calculated, since a known amount of reference template was used. The method described here proved to be very sensitive (10 copies for the competitor-DNA) and was used to quantitate the proviral load during several experiments in which the influence of periodical immunestimulations and the effect of vaccines on the virus load was studied.
在不同生物学问题的背景下,前病毒拷贝数的定量分析很重要。DNA定量分析最可靠的方法是基于对两个长度相似的模板进行共扩增的PCR,即靶序列和参考模板,它们共享相同的引物识别序列。在扩增过程中,这两个模板竞争相同的引物组(竞争性PCR,或cPCR),因此无论循环次数如何,它们都以相同的速率进行扩增。扩增产物可通过其不同长度来区分。经过光密度分析后,由于使用了已知量的参考模板,因此可以计算出实验性感染猫免疫缺陷病毒的猫的前病毒拷贝数。这里描述的方法被证明非常灵敏(竞争DNA为10个拷贝),并用于在多项实验中对前病毒载量进行定量分析,这些实验研究了定期免疫刺激的影响以及疫苗对病毒载量的作用。