• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在大规模DNA序列筛选过程中高效、自动地检测杂合碱基。

Efficient, automatic detection of heterozygous bases during large-scale DNA sequence screening.

作者信息

Phelps R S, Chadwick R B, Conrad M P, Kronick M N, Kamb A

机构信息

Myriad Genetics, Inc., Salt Lake City, UT, USA.

出版信息

Biotechniques. 1995 Dec;19(6):984-9.

PMID:8747666
Abstract

A crucial factor in the success of positional cloning efforts is the ability to screen rapidly many different candidate genes for mutations. By modifying standard software, we have improved the detection of heterozygous base positions in PCR products sequenced by cycle sequencing. A key element of the method is the incorporation of a modified heterozygote detection algorithm that permits the use of DNA sequence data derived from PCR and sequencing reactions that have not been fully optimized. This allows sequencing runs of average quality to be used. We demonstrate that the sensitivity and specificity of the method are well suited to mutation detection applications such as positional cloning.

摘要

定位克隆研究成功的一个关键因素是能够快速筛选许多不同的候选基因突变。通过修改标准软件,我们改进了对循环测序法测定的PCR产物中杂合碱基位置的检测。该方法的一个关键要素是采用了一种改进的杂合子检测算法,该算法允许使用来自尚未完全优化的PCR和测序反应的DNA序列数据。这使得平均质量的测序运行也能得以利用。我们证明,该方法的灵敏度和特异性非常适合于定位克隆等突变检测应用。

相似文献

1
Efficient, automatic detection of heterozygous bases during large-scale DNA sequence screening.在大规模DNA序列筛选过程中高效、自动地检测杂合碱基。
Biotechniques. 1995 Dec;19(6):984-9.
2
Alport syndrome. Molecular genetic aspects.奥尔波特综合征。分子遗传学方面。
Dan Med Bull. 2009 Aug;56(3):105-52.
3
A universal algorithm for de novo decrypting of heterozygous indel sequences: a tool for personalized medicine.一种用于从头解密杂合插入缺失序列的通用算法:个性化医疗的工具。
Clin Chim Acta. 2008 Mar;389(1-2):7-13. doi: 10.1016/j.cca.2007.11.011. Epub 2007 Nov 23.
4
Simulation of normal, carrier and affected controls for large-scale genotyping of cattle for factor XI deficiency.
Genet Mol Res. 2006 Jun 30;5(2):323-32.
5
[The improvement of a direct DNA sequencing method by devising the primer design: detection of lipoprotein lipase gene aberrations].[通过设计引物改进直接DNA测序方法:脂蛋白脂肪酶基因畸变的检测]
Rinsho Byori. 1996 Oct;44(10):983-90.
6
Quantitative detection of HIV-1 drug resistance mutations by automated DNA sequencing.通过自动DNA测序对HIV-1耐药性突变进行定量检测。
Nature. 1993 Oct 14;365(6447):671-3. doi: 10.1038/365671a0.
7
Automated discrimination of polymerase chain reaction products with closely related sequences by software-based detection of characteristic peaks in product ion spectra.通过基于软件检测产物离子光谱中的特征峰自动区分具有密切相关序列的聚合酶链反应产物。
Rapid Commun Mass Spectrom. 2003;17(24):2755-62. doi: 10.1002/rcm.1262.
8
Improved accuracy in direct automated DNA sequencing of small PCR products by optimizing the template concentration.通过优化模板浓度提高小PCR产物直接自动化DNA测序的准确性。
Biotechniques. 1994 Sep;17(3):478-82.
9
Comparative sequence analysis (CSA): a new sequence-based method for the identification and characterization of mutations in DNA.比较序列分析(CSA):一种基于序列的鉴定和表征DNA突变的新方法。
Hum Mutat. 2000 Nov;16(5):437-43. doi: 10.1002/1098-1004(200011)16:5<437::AID-HUMU9>3.0.CO;2-Q.
10
Solid phase DNA minisequencing by an enzymatic luminometric inorganic pyrophosphate detection assay.通过酶促发光无机焦磷酸检测法进行的固相DNA微测序。
Anal Biochem. 1993 Jan;208(1):171-5. doi: 10.1006/abio.1993.1024.

引用本文的文献

1
Exhaustive screening of the acid beta-glucosidase gene, by fluorescence-assisted mismatch analysis using universal primers: mutation profile and genotype/phenotype correlations in Gaucher disease.使用通用引物通过荧光辅助错配分析对酸性β-葡萄糖苷酶基因进行全面筛查:戈谢病的突变谱及基因型/表型相关性
Am J Hum Genet. 1998 Aug;63(2):415-27. doi: 10.1086/301969.
2
Automated detection of point mutations using fluorescent sequence trace subtraction.使用荧光序列迹线减法自动检测点突变。
Nucleic Acids Res. 1998 Jul 15;26(14):3404-9. doi: 10.1093/nar/26.14.3404.
3
Automating the identification of DNA variations using quality-based fluorescence re-sequencing: analysis of the human mitochondrial genome.
利用基于质量的荧光重测序技术自动化识别DNA变异:人类线粒体基因组分析
Nucleic Acids Res. 1998 Feb 15;26(4):967-73. doi: 10.1093/nar/26.4.967.
4
PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing.PolyPhred:利用基于荧光的重测序技术自动检测单核苷酸替换并进行基因分型。
Nucleic Acids Res. 1997 Jul 15;25(14):2745-51. doi: 10.1093/nar/25.14.2745.
5
Detection of all single-base mismatches in solution by chemiluminescence.通过化学发光检测溶液中的所有单碱基错配。
Nucleic Acids Res. 1996 Dec 15;24(24):4998-5003. doi: 10.1093/nar/24.24.4998.
6
Detection of unknown mutations in DNA: a catch-22.
Am J Hum Genet. 1996 Aug;59(2):289-91.
7
Exhaustive mutation scanning by fluorescence-assisted mismatch analysis discloses new genotype-phenotype correlations in angiodema.
Am J Hum Genet. 1996 Aug;59(2):308-19.