• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

分子亲脂性计算程序预测能力的比较评估。

Comparative evaluation of the predictive power of calculation procedures for molecular lipophilicity.

作者信息

Mannhold R, Rekker R F, Sonntag C, ter Laak A M, Dross K, Polymeropoulos E E

机构信息

Department of Lasermedicine, Heinrich-Hein-Universität, Düsseldorf, Germany.

出版信息

J Pharm Sci. 1995 Dec;84(12):1410-9. doi: 10.1002/jps.2600841206.

DOI:10.1002/jps.2600841206
PMID:8748322
Abstract

The predictive power of four calculation procedures for molecular lipophilicity is checked by comparing with experimental data (log P and chromatographical RMw) taken from the literature. Two sets of test compounds are used: the first comprises simple organic molecules and the second consists of more complicated drug molecules. Our comparative evaluation leads us to conclude that the predictive power is significantly better for not too complicated organic molecules than for drugs with complicated structural pattern. The four investigated calculation procedures should be arranged in two groups with significantly differing predictive power: (a) Rekker and Hansch/Leo and (b) Ghose/Crippen and Suzuki/Kudo. This conclusion is based on a statistical control using log P and RMw as the independent parameters. Correlations have in common: (1) slopes in correlations with calculated data based on fragmental methods are not significantly different from 1; calculations with data from atom-based procedures show up in most cases with slopes below 1. (2) The accompanying overall statistics underline the superiority of the fragmental methods. We think that all four tested calculation procedures have their own restrictions; for future development we would advise a thorough reconsideration of structural effects not fully (or even not at all) incorporated in the data sets. Special attention will have to be paid to the conformational aspects of lipophilic behavior.

摘要

通过与文献中的实验数据(log P和色谱保留值RMw)进行比较,检验了四种分子亲脂性计算方法的预测能力。使用了两组测试化合物:第一组包括简单有机分子,第二组由更复杂的药物分子组成。我们的比较评估得出结论,对于不太复杂的有机分子,预测能力明显优于结构模式复杂的药物。所研究的四种计算方法应分为两组,其预测能力有显著差异:(a)Rekker和Hansch/Leo方法,以及(b)Ghose/Crippen和Suzuki/Kudo方法。这一结论基于以log P和RMw作为独立参数的统计检验。相关性有以下共同特点:(1)基于片段法与计算数据的相关性斜率与1无显著差异;基于原子法的数据计算在大多数情况下斜率低于1。(2) 伴随的总体统计数据突出了片段法的优越性。我们认为所有四种测试计算方法都有其自身的局限性;对于未来的发展,我们建议彻底重新考虑未完全(甚至根本未)纳入数据集的结构效应。必须特别关注亲脂性行为的构象方面。

相似文献

1
Comparative evaluation of the predictive power of calculation procedures for molecular lipophilicity.分子亲脂性计算程序预测能力的比较评估。
J Pharm Sci. 1995 Dec;84(12):1410-9. doi: 10.1002/jps.2600841206.
2
Multivariate analysis of experimental and computational descriptors of molecular lipophilicity.
J Comput Aided Mol Des. 1998 Nov;12(6):573-81. doi: 10.1023/a:1008060415622.
3
Evaluation of the predictive power of calculation procedure for molecular hydrophobicity of some estradiol derivates.某些雌二醇衍生物分子疏水性计算程序预测能力的评估。
J Chromatogr B Analyt Technol Biomed Life Sci. 2002 Jan 5;766(1):67-75. doi: 10.1016/s0378-4347(01)00435-2.
4
ADME evaluation in drug discovery. 2. Prediction of partition coefficient by atom-additive approach based on atom-weighted solvent accessible surface areas.药物发现中的ADME评估。2.基于原子加权溶剂可及表面积的原子加和法预测分配系数。
J Chem Inf Comput Sci. 2003 May-Jun;43(3):1058-67. doi: 10.1021/ci034007m.
5
Computational aqueous solubility prediction for drug-like compounds in congeneric series.同系物系列中类药物化合物的计算水溶解度预测
Eur J Med Chem. 2008 Mar;43(3):501-12. doi: 10.1016/j.ejmech.2007.04.009. Epub 2007 May 6.
6
Calculation of aqueous solubility of crystalline un-ionized organic chemicals and drugs based on structural similarity and physicochemical descriptors.基于结构相似性和理化描述符计算结晶非离解有机化学品和药物的水溶解度。
J Chem Inf Model. 2014 Feb 24;54(2):683-91. doi: 10.1021/ci400692n. Epub 2014 Feb 5.
7
Prediction of vitreal half-life based on drug physicochemical properties: quantitative structure-pharmacokinetic relationships (QSPKR).基于药物理化性质预测玻璃体内半衰期:定量构效关系(QSPKR)。
Pharm Res. 2009 May;26(5):1236-60. doi: 10.1007/s11095-008-9728-7. Epub 2008 Oct 8.
8
Global and local computational models for aqueous solubility prediction of drug-like molecules.用于预测类药物分子水溶性的全局和局部计算模型。
J Chem Inf Comput Sci. 2004 Jul-Aug;44(4):1477-88. doi: 10.1021/ci049909h.
9
[Computerized logP prediction using fragment methods].[使用片段方法进行计算机化的logP预测]
Acta Pharm Hung. 1998 Jan;68(1):39-48.
10
Development of improved empirical models for estimating the binding constant of a beta-cyclodextrin inclusion complex.用于估算β-环糊精包合物结合常数的改进经验模型的开发。
Pharm Res. 2009 Jan;26(1):161-71. doi: 10.1007/s11095-008-9733-x. Epub 2008 Oct 9.

引用本文的文献

1
Partitioning of Antioxidants in Edible Oil-Water Binary Systems and in Oil-in-Water Emulsions.食用油-水二元体系及水包油乳液中抗氧化剂的分配
Antioxidants (Basel). 2023 Mar 28;12(4):828. doi: 10.3390/antiox12040828.
2
A model of interaction between nicotinamide adenine dinucleotide phosphate (NADPH) oxidase and apocynin analogues by docking method.通过对接方法建立烟酰胺腺嘌呤二核苷酸磷酸(NADPH)氧化酶与载脂蛋白A类似物之间相互作用的模型。
Int J Mol Sci. 2013 Jan 4;14(1):807-17. doi: 10.3390/ijms14010807.
3
Physiological phenotype and vulnerability in Parkinson's disease.
帕金森病的生理表型和脆弱性。
Cold Spring Harb Perspect Med. 2012 Jul;2(7):a009290. doi: 10.1101/cshperspect.a009290.
4
The role of calcium and mitochondrial oxidant stress in the loss of substantia nigra pars compacta dopaminergic neurons in Parkinson's disease.钙和线粒体氧化应激在帕金森病中黑质致密部多巴胺能神经元丧失中的作用。
Neuroscience. 2011 Dec 15;198:221-31. doi: 10.1016/j.neuroscience.2011.08.045. Epub 2011 Aug 25.
5
The origins of oxidant stress in Parkinson's disease and therapeutic strategies.氧化应激在帕金森病中的起源和治疗策略。
Antioxid Redox Signal. 2011 Apr 1;14(7):1289-301. doi: 10.1089/ars.2010.3521. Epub 2010 Dec 15.
6
Calcium, cellular aging, and selective neuronal vulnerability in Parkinson's disease.钙、细胞衰老与帕金森病中的选择性神经元易损性。
Cell Calcium. 2010 Feb;47(2):175-82. doi: 10.1016/j.ceca.2009.12.003. Epub 2010 Jan 6.
7
Calcium homeostasis, selective vulnerability and Parkinson's disease.钙稳态、选择性易损性与帕金森病。
Trends Neurosci. 2009 May;32(5):249-56. doi: 10.1016/j.tins.2009.01.006. Epub 2009 Mar 21.
8
Substructure and whole molecule approaches for calculating log P.用于计算log P的子结构和全分子方法。
J Comput Aided Mol Des. 2001 Apr;15(4):337-54. doi: 10.1023/a:1011107422318.
9
A self-consistent, microenvironment modulated screened coulomb potential approximation to calculate pH-dependent electrostatic effects in proteins.一种自洽的、微环境调制的屏蔽库仑势近似方法,用于计算蛋白质中pH依赖的静电效应。
Biophys J. 1999 Jul;77(1):3-22. doi: 10.1016/S0006-3495(99)76868-2.
10
N-Substituted analogues of S-nitroso-N-acetyl-D,L-penicillamine: chemical stability and prolonged nitric oxide mediated vasodilatation in isolated rat femoral arteries.S-亚硝基-N-乙酰-D,L-青霉胺的N-取代类似物:在离体大鼠股动脉中的化学稳定性及一氧化氮介导的血管舒张作用的延长
Br J Pharmacol. 1999 Feb;126(3):639-48. doi: 10.1038/sj.bjp.0702346.