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牛蛙眼晶状体γ-晶体蛋白的特性:不同两栖类物种间序列比较揭示的γ-晶体蛋白多基因家族的复杂性

Characterization of gamma-crystallin from the eye lens of bullfrog: complexity of gamma-crystallin multigene family as revealed by sequence comparison among different amphibian species.

作者信息

Lu S F, Pan F M, Chiou S H

机构信息

Laboratory of Crystallin Research, National Taiwan University, Taipei.

出版信息

J Protein Chem. 1996 Jan;15(1):103-13. doi: 10.1007/BF01886816.

Abstract

gamma-Crystallin is the major and most abundant lens protein present in the eye lens of lower vertebrates such as amphibian and piscine species. To facilitate structural characterization of gamma-crystallins isolated from the lens of the bullfrog (Rana catesbeiana), a cDNA mixture was synthesized from the poly(A)+mRNA isolated from fresh eye lenses. cDNA encoding gamma-crystallin was then amplified using polymerase chain reaction (PCR) based on two primers designed according to the relatively conserved N- and C-terminal sequences of known gamma-crystallins from teleostean fishes. PCR-amplified product corresponding to gamma-crystallin isoforms was obtained, which was then subcloned in pUC18 vector and transformed into Escherichia coli strain JM109. Plasmids containing amplified gamma-crystallin cDNAs were purified and prepared for nucleotide sequencing by the dideoxynucleotide chain-termination method. Sequencing several clones containing DNA inserts of about 0.54 kb revealed the presence of two isoforms with an open reading frame of 534 base pairs, covering two gamma-crystallins each with a deduced protein sequence of 177 amino acids including the translation-initiating methionine. These gamma-crystallins of pI 6.364 and 6.366 contain a low-methionine content of 2.81%, in contrast to 11-16% obtained for those gamma-crystallins with high-methionine content from most teleostean lenses. Pairwise sequence comparison of bullfrog gamma-crystallins with those published sequences of gamma-crystallins from carp, shark, Xenopus and another Rana frog, bovine, and human lenses indicates that there is only 46-63% sequence similarity among these species, revealing that amphibians possess a very complex and heterogeneous group of gamma-crystallins even from closely related species of Rana frogs. The sequence analysis and comparison of various isoforms of the frog gamma-crystallin family provide a firm basis for identifying these lens proteins as members of a multigene family more complex than that reported for mammalian gamma-crystallins.

摘要

γ-晶状体蛋白是存在于两栖类和鱼类等低等脊椎动物晶状体中的主要且含量最丰富的晶状体蛋白。为便于对从牛蛙(Rana catesbeiana)晶状体中分离出的γ-晶状体蛋白进行结构表征,从新鲜晶状体中分离出的聚腺苷酸加尾信使核糖核酸(poly(A)+mRNA)合成了互补脱氧核糖核酸(cDNA)混合物。然后,根据硬骨鱼类已知γ-晶状体蛋白相对保守的N端和C端序列设计了两条引物,利用聚合酶链反应(PCR)扩增编码γ-晶状体蛋白的cDNA。获得了对应γ-晶状体蛋白异构体的PCR扩增产物,随后将其亚克隆到pUC18载体中,并转化到大肠杆菌JM109菌株中。纯化含有扩增γ-晶状体蛋白cDNA的质粒,并通过双脱氧核苷酸链终止法进行核苷酸测序准备。对几个含有约0.54 kb DNA插入片段的克隆进行测序,发现存在两种异构体,其开放阅读框为534个碱基对,涵盖两种γ-晶状体蛋白,每种γ-晶状体蛋白推导的蛋白质序列为177个氨基酸,包括起始翻译的甲硫氨酸。这些等电点为6.364和6.366的γ-晶状体蛋白甲硫氨酸含量较低,为2.81%,相比之下,大多数硬骨鱼晶状体中高甲硫氨酸含量的γ-晶状体蛋白的甲硫氨酸含量为11%-16%。牛蛙γ-晶状体蛋白与鲤鱼、鲨鱼、非洲爪蟾和另一种林蛙、牛和人晶状体中已发表的γ-晶状体蛋白序列进行成对序列比较表明,这些物种之间的序列相似性仅为46%-63%,这表明即使是来自亲缘关系密切的林蛙物种,两栖动物也拥有非常复杂且异质的γ-晶状体蛋白群体。青蛙γ-晶状体蛋白家族各种异构体的序列分析和比较为将这些晶状体蛋白鉴定为比哺乳动物γ-晶状体蛋白报道的更为复杂的多基因家族成员提供了坚实基础。

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