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疏水性探针分子在膜内部的分布与扩散系数:理论与模拟

Distribution and diffusivity of a hydrophobic probe molecule in the interior of a membrane: theory and simulation.

作者信息

Huertas M L, Cruz V, Cascales J J, Acuña A U, García de la Torre J

机构信息

Departamento de Química Física, Facultad de Química, Universidad de Murcia, Spain.

出版信息

Biophys J. 1996 Sep;71(3):1428-39. doi: 10.1016/S0006-3495(96)79344-X.

DOI:10.1016/S0006-3495(96)79344-X
PMID:8874017
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1233610/
Abstract

We propose a simple model for the distribution of position and orientation and the diffusion of a hydrophobic probe molecule embedded in a membrane. The molecule experiences both a Maier-Saupe orienting potential as well as an enclosing potential of repulsion from the membrane walls. A statistical thermodynamics treatment of the model provides predictions of the location and orientation of the molecule within the membrane. In particular, we evaluate the order parameter of the molecule in terms of the model constants. The diffusivity of the probe is studied by Brownian dynamics simulation. For rotational diffusion, we check an available analytical approximate treatment that allows for the prediction of the dynamics in terms of equilibrium quantities. We also pay attention to quantities related to the initial and mean reorientational rate of the probe. For translational diffusion, we use the simulation results to analyze some general aspects of lateral and transversal diffusion.

摘要

我们提出了一个简单的模型,用于描述嵌入膜中的疏水探针分子的位置和取向分布以及扩散情况。该分子既受到迈尔 - 绍普取向势,也受到来自膜壁的排斥性围闭势。对该模型进行统计热力学处理,可以预测分子在膜内的位置和取向。特别是,我们根据模型常数评估分子的序参量。通过布朗动力学模拟研究探针的扩散系数。对于旋转扩散,我们检验了一种可用的解析近似处理方法,该方法能够根据平衡量预测动力学。我们还关注与探针初始和平均重取向速率相关的量。对于平动扩散,我们利用模拟结果分析横向和纵向扩散的一些一般方面。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0bbf/1233610/a36373b9534e/biophysj00043-0276-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0bbf/1233610/e56f1eb1a26a/biophysj00043-0272-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0bbf/1233610/3512c71e2196/biophysj00043-0276-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0bbf/1233610/a36373b9534e/biophysj00043-0276-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0bbf/1233610/e56f1eb1a26a/biophysj00043-0272-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0bbf/1233610/3512c71e2196/biophysj00043-0276-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0bbf/1233610/a36373b9534e/biophysj00043-0276-b.jpg

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本文引用的文献

1
Solute diffusion in lipid bilayer membranes: an atomic level study by molecular dynamics simulation.脂质双分子层膜中的溶质扩散:基于分子动力学模拟的原子水平研究
Biochemistry. 1993 Nov 30;32(47):12624-37. doi: 10.1021/bi00210a010.
2
Molecular dynamics simulations of a lipid bilayer and of hexadecane: an investigation of membrane fluidity.脂质双层和十六烷的分子动力学模拟:膜流动性研究
Science. 1993 Oct 8;262(5131):223-6. doi: 10.1126/science.8211140.
3
Molecular dynamics simulation of a phospholipid membrane.磷脂膜的分子动力学模拟
Eur Biophys J. 1994;22(6):423-36. doi: 10.1007/BF00180163.
4
Effect of librational motion on fluorescence depolarization and nuclear magnetic resonance relaxation in macromolecules and membranes.大分子和膜中振动运动对荧光去极化和核磁共振弛豫的影响。
Biophys J. 1980 Jun;30(3):489-506. doi: 10.1016/S0006-3495(80)85109-5.
5
Hydrodynamic properties of complex, rigid, biological macromolecules: theory and applications.复杂、刚性生物大分子的流体动力学性质:理论与应用
Q Rev Biophys. 1981 Feb;14(1):81-139. doi: 10.1017/s0033583500002080.
6
Rotational diffusion of biological macromolecules by time-resolved delayed luminescence (phosphorescence, fluorescence) anisotropy.通过时间分辨延迟发光(磷光、荧光)各向异性研究生物大分子的旋转扩散。
Ann N Y Acad Sci. 1981;366:176-96. doi: 10.1111/j.1749-6632.1981.tb20753.x.
7
Effect of orientational order on the decay of the fluorescence anisotropy in membrane suspensions. Experimental verification on unilamellar vesicles and lipid/alpha-lactalbumin complexes.取向有序对膜悬浮液中荧光 anisotropy 衰减的影响。对单层囊泡和脂质/α-乳白蛋白复合物的实验验证。
Biophys J. 1984 Oct;46(4):525-39. doi: 10.1016/S0006-3495(84)84050-3.
8
Lateral diffusion in the hydrophobic region of membranes: use of pyrene excimers as optical probes.膜疏水区域中的侧向扩散:使用芘激基缔合物作为光学探针。
Biochim Biophys Acta. 1974 Feb 26;339(1):103-15. doi: 10.1016/0005-2736(74)90336-8.
9
Brownian dynamics simulation of restricted rotational diffusion.受限旋转扩散的布朗动力学模拟
Biophys J. 1987 Aug;52(2):303-10. doi: 10.1016/S0006-3495(87)83217-4.
10
The lateral fluidity of erythrocyte membranes. Temperature and pressure dependence.
Biophys Chem. 1987 Dec;28(3):273-81. doi: 10.1016/0301-4622(87)80098-4.