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P-选择素表皮生长因子结构域的结构与功能

Structure and function of the epidermal growth factor domain of P-selectin.

作者信息

Freedman S J, Sanford D G, Bachovchin W W, Furie B C, Baleja J D, Furie B

机构信息

Center for Hemostasis and Thrombosis Research, New England Medical Center, Boston, Massachusetts, USA.

出版信息

Biochemistry. 1996 Oct 29;35(43):13733-44. doi: 10.1021/bi9610257.

Abstract

P-selectin is a multidomain adhesion protein on the surface of activated platelets and endothelial cells that functions in the recruitment of leukocytes to the site of inflammation. The amino-terminal lectin and EGF domains constitute the ligand recognition unit. We have produced a synthetic 40-residue P-selectin EGF domain (P-sel:EGF) to examine the structure and function of this domain independent of P-selectin. The peptide was folded in vitro and exhibited the same disulfide bonding pattern as other EGF-like domains. P-sel:EGF did not inhibit P-selectin-mediated cellular adhesion assays, indicating that the lectin domain is also required. We undertook the study of the P-selectin EGF by 1H NMR to determine its structure independent of the lectin domain and to compare its structure to that of E-selectin determined crystallographically [Graves et al. (1994) Nature 367, 532]. Although the binding of P-selectin to its carbohydrate ligand is calcium dependent, and some EGF domains have calcium binding sites, addition of calcium had no effect on the NMR spectrum or on the pH-induced changes. Nearly complete resonance assignments were made from 2D 1H NMR spectra at pH 6.0. Two sections of antiparallel beta-sheet were identified on the basis of the pattern of long-range NOEs, 3JHN alpha coupling constants, and slowly exchanging amides. The solution structure of the peptide backbone was determined using distance geometry and simulated annealing calculations. The backbone RMSD to the geometric average for 19 final structures is 0.64 +/- 0.17 A. The resulting fold closely resembles that of other EGF-like peptides, including the E-selectin EGF domain (RMSD approximately 1.08 A). However, compared to the E-selectin EGF structure which also contains the lectin domain, some residues from 1-11 are less ordered, and novel contacts occur between the amino terminus and the core beta-sheet. Despite marked structural homology of the selectin polypeptide backbones, the selectin EGF surfaces show unique distributions of charged residues, a feature that likely correlates to the functional differences.

摘要

P-选择素是一种存在于活化血小板和内皮细胞表面的多结构域黏附蛋白,其作用是将白细胞募集到炎症部位。氨基末端的凝集素和表皮生长因子(EGF)结构域构成配体识别单元。我们制备了一种由40个残基组成的合成P-选择素EGF结构域(P-sel:EGF),以独立于P-选择素研究该结构域的结构和功能。该肽在体外折叠,并呈现出与其他类EGF结构域相同的二硫键连接模式。P-sel:EGF并未抑制P-选择素介导的细胞黏附实验,这表明凝集素结构域也是必需的。我们通过1H核磁共振(NMR)对P-选择素EGF进行研究,以确定其独立于凝集素结构域的结构,并将其结构与通过晶体学确定的E-选择素的结构进行比较[格雷夫斯等人(1994年)《自然》367, 532]。尽管P-选择素与其碳水化合物配体的结合依赖于钙,并且一些EGF结构域具有钙结合位点,但添加钙对NMR谱或pH诱导的变化没有影响。在pH 6.0条件下,通过二维1H NMR谱几乎完成了所有共振归属。基于长程核Overhauser效应(NOE)模式、3JHNα耦合常数和缓慢交换的酰胺,确定了两段反平行β-折叠。使用距离几何和模拟退火计算确定了肽主链的溶液结构。19个最终结构的主链均方根偏差(RMSD)与几何平均值的偏差为0.64±0.17 Å。所得折叠结构与其他类EGF肽非常相似,包括E-选择素EGF结构域(RMSD约为1.08 Å)。然而,与同样包含凝集素结构域的E-选择素EGF结构相比,1至11位的一些残基有序性较低,并且在氨基末端与核心β-折叠之间出现了新的接触。尽管选择素多肽主链具有明显的结构同源性,但选择素EGF表面显示出带电残基的独特分布,这一特征可能与功能差异相关。

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