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Sequence analysis and allelic designation of the two short tandem repeat loci D18S51 and D8S1179.

作者信息

Barber M D, Parkin B H

机构信息

Metropolitan Police Forensic Science Laboratory, London, UK.

出版信息

Int J Legal Med. 1996;109(2):62-5. doi: 10.1007/BF01355518.

DOI:10.1007/BF01355518
PMID:8912049
Abstract

This paper reports the sequences of eleven D8S1179 and twenty one D18S51 alleles. The D8S1179 alleles ranged in size from 162 bp to 202 bp and increased in size by regular 4 bp increments. They were shown to possess a compound repeat region composed of the tetranucleotides TCTA and TCTG. Alleles at the D18S51 locus ranged in size from 271 bp to 343 bp and possessed a simple repeat region composed of the tetranucleotide AGAA. The majority of alleles increased in size by 4 bp increments corresponding to the addition of one tetranucleotide repeat unit. However, three alleles differed in size by 2 bp from the 4 bp increment as a result of a dinucleotide insertion within the 3' flanking region. These alleles also exhibited an altered 3' flanking sequence in the first four nucleotides following the repeat region. The allelic designations proposed for these loci on the basis of this sequence data are currently being used in a multiplex PCR profiling system employed in a National DNA database in the United Kingdom.

摘要

相似文献

1
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2
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本文引用的文献

1
Structural variation in the alleles of a short tandem repeat system at the human alpha fibrinogen locus.人类α纤维蛋白原基因座短串联重复序列系统等位基因的结构变异。
Int J Legal Med. 1996;108(4):180-5. doi: 10.1007/BF01369788.
2
Evaluation of an ACTBP2 ladder composed of 26 sequenced alleles.
Int J Legal Med. 1995;108(2):75-8. doi: 10.1007/BF01369908.
3
Forensic validation of the STR systems SE 33 and TC 11.
Int J Legal Med. 1993;105(6):315-20. doi: 10.1007/BF01222114.
4
A polymorphic X-linked tetranucleotide repeat locus displaying a high rate of new mutation: implications for mechanisms of mutation at short tandem repeat loci.
一个呈现高新发突变率的多态性X连锁四核苷酸重复序列位点:对短串联重复序列位点的突变机制的启示
Hum Mol Genet. 1993 Apr;2(4):431-7. doi: 10.1093/hmg/2.4.431.
5
Amplified fragment length polymorphism analysis of the VNTR locus D1S80 in central Spain.
Int J Legal Med. 1993;105(6):311-4. doi: 10.1007/BF01222113.
6
A microsatellite genetic linkage map of human chromosome 18.人类第18号染色体的微卫星遗传连锁图谱。
Genomics. 1993 Jan;15(1):48-56. doi: 10.1006/geno.1993.1008.
7
Evaluation of an automated DNA profiling system employing multiplex amplification of four tetrameric STR loci.采用四个四聚体短串联重复序列(STR)位点多重扩增的自动化DNA分型系统的评估。
Int J Legal Med. 1994;106(6):302-11. doi: 10.1007/BF01224776.
8
Locus ACTBP2 (SE33). Sequencing data reveal considerable polymorphism.
Int J Legal Med. 1994;106(5):262-7. doi: 10.1007/BF01225417.
9
Highly discriminating heptaplex short tandem repeat PCR system for forensic identification.
Biotechniques. 1995 Jan;18(1):116-8, 120-1.
10
Swiss population data and forensic efficiency values on 3 tetrameric short tandem repeat loci-HUMTH01, TPOX, and CSF1PO-derived using a STR multiplex system.利用短串联重复序列(STR)复合扩增系统得出的瑞士人群数据以及3个四聚体短串联重复序列基因座(HUMTH01、TPOX和CSF1PO)的法医鉴定效率值。
Int J Legal Med. 1995;107(5):246-9. doi: 10.1007/BF01245482.