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转录诱导突变:大肠杆菌转录过程中非转录链上C到T突变的增加。

Transcription-induced mutations: increase in C to T mutations in the nontranscribed strand during transcription in Escherichia coli.

作者信息

Beletskii A, Bhagwat A S

机构信息

Department of Chemistry, Wayne State University, Detroit, MI 48202, USA.

出版信息

Proc Natl Acad Sci U S A. 1996 Nov 26;93(24):13919-24. doi: 10.1073/pnas.93.24.13919.

DOI:10.1073/pnas.93.24.13919
PMID:8943036
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC19468/
Abstract

Cytosines in single-stranded DNA deaminate to uracils at 140 times the rate for cytosines in double-stranded DNA. If resulting uracils are not replaced with cytosine, C to T mutations occur. These facts suggest that cellular processes such as transcription that create single-stranded DNA should promote C to T mutations. We tested this hypothesis with the Escherichia coli tac promoter and found that induction of transcription causes approximately 4-fold increase in the frequency of C to U or 5-methylcytosine to T deaminations in the nontranscribed strand. Excess mutations caused by C to U deaminations were reduced, but not eliminated, by uracil-DNA glycosylase. Similarly, mutations caused by 5-methylcytosine to T deaminations were only partially reduced by the very short-patch repair process in E.coli. These effects are unlikely to be caused by differential repair of the two strands, and our results suggest that all actively transcribed genes in E. coli should acquire more C to T mutations in the nontranscribed strand.

摘要

单链DNA中的胞嘧啶脱氨基形成尿嘧啶的速率是双链DNA中胞嘧啶的140倍。如果产生的尿嘧啶没有被胞嘧啶取代,就会发生C到T的突变。这些事实表明,诸如转录等产生单链DNA的细胞过程应该会促进C到T的突变。我们用大肠杆菌tac启动子检验了这一假设,发现转录的诱导会使非转录链中C到U或5-甲基胞嘧啶到T的脱氨基频率增加约4倍。尿嘧啶-DNA糖基化酶减少了由C到U脱氨基引起的过量突变,但并未消除。同样,大肠杆菌中极短补丁修复过程仅部分减少了由5-甲基胞嘧啶到T脱氨基引起的突变。这些效应不太可能是由两条链的差异修复引起的,我们的结果表明,大肠杆菌中所有活跃转录的基因在非转录链中应该会获得更多的C到T突变。

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本文引用的文献

1
Very short patch repair: reducing the cost of cytosine methylation.极短片段修复:降低胞嘧啶甲基化成本
Mol Microbiol. 1996 May;20(3):467-73. doi: 10.1046/j.1365-2958.1996.5291066.x.
2
Overproduction of DNA cytosine methyltransferases causes methylation and C --> T mutations at non-canonical sites.DNA胞嘧啶甲基转移酶的过度产生会导致非规范位点的甲基化和C→T突变。
J Biol Chem. 1996 Mar 29;271(13):7851-9. doi: 10.1074/jbc.271.13.7851.
3
Asymmetries generated by transcription-coupled repair in enterobacterial genes.肠道细菌基因中转录偶联修复产生的不对称性。
Science. 1996 Apr 5;272(5258):107-9. doi: 10.1126/science.272.5258.107.
4
Cytosine deamination in mismatched base pairs.错配碱基对中的胞嘧啶脱氨基作用。
Biochemistry. 1993 Jul 6;32(26):6523-30. doi: 10.1021/bi00077a005.
5
A DNA repair process in Escherichia coli corrects U:G and T:G mismatches to C:G at sites of cytosine methylation.大肠杆菌中的一种DNA修复过程可将胞嘧啶甲基化位点处的U:G和T:G错配校正为C:G。
Mol Gen Genet. 1994 Apr;243(2):244-8. doi: 10.1007/BF00280322.
6
The rate of hydrolytic deamination of 5-methylcytosine in double-stranded DNA.双链DNA中5-甲基胞嘧啶的水解脱氨速率。
Nucleic Acids Res. 1994 Mar 25;22(6):972-6. doi: 10.1093/nar/22.6.972.
7
Cytosine deaminations catalyzed by DNA cytosine methyltransferases are unlikely to be the major cause of mutational hot spots at sites of cytosine methylation in Escherichia coli.由DNA胞嘧啶甲基转移酶催化的胞嘧啶脱氨基作用不太可能是大肠杆菌中胞嘧啶甲基化位点突变热点的主要原因。
Proc Natl Acad Sci U S A. 1994 Feb 15;91(4):1574-8. doi: 10.1073/pnas.91.4.1574.
8
Mutations in the p53 tumor suppressor gene: clues to cancer etiology and molecular pathogenesis.p53肿瘤抑制基因的突变:癌症病因学和分子发病机制的线索
Cancer Res. 1994 Sep 15;54(18):4855-78.
9
Substrate spectrum of human excinuclease: repair of abasic sites, methylated bases, mismatches, and bulky adducts.人切除核酸酶的底物谱:无碱基位点、甲基化碱基、错配及大体积加合物的修复
Proc Natl Acad Sci U S A. 1994 Dec 6;91(25):12213-7. doi: 10.1073/pnas.91.25.12213.
10
Sequence spectra of spontaneous lacZ gene mutations in transgenic mouse somatic and germline tissues.转基因小鼠体细胞和生殖细胞组织中自发lacZ基因突变的序列谱。
Mutagenesis. 1994 Sep;9(5):451-8. doi: 10.1093/mutage/9.5.451.