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结节性硬化错构瘤中的杂合性缺失

Loss of heterozygosity in tuberous sclerosis hamartomas.

作者信息

Sepp T, Yates J R, Green A J

机构信息

Department of Pathology, University of Cambridge, UK.

出版信息

J Med Genet. 1996 Nov;33(11):962-4. doi: 10.1136/jmg.33.11.962.

DOI:10.1136/jmg.33.11.962
PMID:8950679
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1050793/
Abstract

We have previously described in tuberous sclerosis (TSC) hamartomas the phenomenon of loss of heterozygosity (LOH) for DNA markers in the region of both the TSC2 gene on chromosome 16p13.3 and the TSC1 gene on 9q34. We now describe the spectrum of LOH in 51 TSC hamartomas from 34 cases of TSC. DNA was extracted from leucocytes or normal paraffin embedded tissue, and from frozen paraffin embedded hamartoma tissue from the same patient. The samples were analysed for 11 markers spanning the TSC1 locus and nine markers spanning the TSC2 locus. Twenty-one of 51 hamartomas showed LOH (41%). There was significantly more LOH on 16p13.3, with 16 hamartomas showing LOH around TSC2, and five in the vicinity of TSC1. No hamartoma showed LOH for markers around both loci. All the areas of LOH on chromosome 9 were large, but the smallest region of overlap lay between the markers D9S149 and D9S114, providing independent evidence for the localisation of the TSC1 gene. These data show that LOH is a common finding in a wide range of hamartomas, affecting the same TSC locus in different lesions from the same patient but not affecting both loci. These data support the hypothesis that both the TSC genes act as tumour suppressors and that the manifestations of TSC in patients with germline TSC mutations rise from "second hit" somatic mutations inactivating the remaining normal copy of the TSC gene.

摘要

我们之前曾描述过结节性硬化症(TSC)错构瘤中,位于16号染色体13.3区的TSC2基因和9号染色体34区的TSC1基因区域内DNA标记的杂合性缺失(LOH)现象。现在我们描述了来自34例TSC患者的51个TSC错构瘤中的LOH谱。从白细胞或正常石蜡包埋组织以及同一患者的冷冻石蜡包埋错构瘤组织中提取DNA。对跨越TSC1基因座的11个标记和跨越TSC2基因座的9个标记进行样本分析。51个错构瘤中有21个显示出LOH(41%)。16号染色体13.3区的LOH明显更多,有16个错构瘤在TSC2周围显示出LOH,5个在TSC1附近。没有错构瘤在两个基因座周围的标记处都显示出LOH。9号染色体上所有的LOH区域都很大,但最小的重叠区域位于标记D9S149和D9S114之间,为TSC1基因的定位提供了独立证据。这些数据表明,LOH在广泛的错构瘤中是一个常见发现,在同一患者的不同病变中影响相同的TSC基因座,但不会影响两个基因座。这些数据支持了以下假设:TSC两个基因均作为肿瘤抑制基因起作用,并且患有种系TSC突变的患者中TSC的表现源于使TSC基因的其余正常拷贝失活的“二次打击”体细胞突变。

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Loss of heterozygosity in tuberous sclerosis hamartomas.结节性硬化错构瘤中的杂合性缺失
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本文引用的文献

1
Apparent preferential loss of heterozygosity at TSC2 over TSC1 chromosomal region in tuberous sclerosis hamartomas.结节性硬化错构瘤中,TSC2基因座相对于TSC1染色体区域明显存在杂合性优先丢失。
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Loss of heterozygosity on chromosome 16p13.3 in hamartomas from tuberous sclerosis patients.结节性硬化症患者错构瘤中16号染色体p13.3区域的杂合性缺失
Nat Genet. 1994 Feb;6(2):193-6. doi: 10.1038/ng0294-193.
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Two loci for tuberous sclerosis: one on 9q34 and one on 16p13.
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Report and abstracts of the Third International Workshop on Chromosome 9. Cambridge, United Kingdom, 9-11 April, 1994.
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5
The tuberous sclerosis gene on chromosome 9q34 acts as a growth suppressor.位于9号染色体长臂34区的结节性硬化症基因发挥着生长抑制作用。
Hum Mol Genet. 1994 Oct;3(10):1833-4. doi: 10.1093/hmg/3.10.1833.
6
9q34 loss of heterozygosity in a tuberous sclerosis astrocytoma suggests a growth suppressor-like activity also for the TSC1 gene.结节性硬化星形细胞瘤中9号染色体长臂34区杂合性缺失表明TSC1基因也具有类似生长抑制因子的活性。
Hum Mol Genet. 1994 Oct;3(10):1829-32. doi: 10.1093/hmg/3.10.1829.
7
Identification of tuberin, the tuberous sclerosis-2 product. Tuberin possesses specific Rap1GAP activity.结节性硬化症2蛋白产物结节蛋白的鉴定。结节蛋白具有特定的Rap1GAP活性。
J Biol Chem. 1995 Jul 7;270(27):16409-14. doi: 10.1074/jbc.270.27.16409.
8
Loss of heterozygosity in the tuberous sclerosis (TSC2) region of chromosome band 16p13 occurs in sporadic as well as TSC-associated renal angiomyolipomas.在散发性以及与结节性硬化症(TSC)相关的肾血管平滑肌脂肪瘤中,均出现了16号染色体短臂1区带13亚带(16p13)的结节性硬化症(TSC2)区域杂合性缺失。
Genes Chromosomes Cancer. 1995 Aug;13(4):295-8. doi: 10.1002/gcc.2870130411.