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嗜热栖热菌核糖体蛋白L1的RNA结合特性

[RNA-binding properties of ribosomal protein L1 from Thermus thermophilus].

作者信息

Elisekina I A, Avliiakulov N K, Grishkovskaia I B, Muranova T A, Sedel'nikova S E, Garber M B

出版信息

Biokhimiia. 1996 Nov;61(11):2040-4.

PMID:9004863
Abstract

Fragments of the ribosomal protein L1 from Thermus thermophilus were obtained by limited trypsinolysis and spontaneous proteolysis. Binding of the intact L1 and its proteolytic fragments to 23S ribosomal RNA was studied. First eight N-terminal amino acids are important for RNA binding because protein L1 lacking these amino acids exhibits reduced 23S rRNA binding. Additional cleavage of the polypeptide chain between residues 36 and 37 completely abolishes RNA binding. Comparison of these data with recently determined structure of protein L1 from T. thermophilus suggests the nature of interactions which can determine specific and strong association of the protein L1 with 23S rRNA.

摘要

嗜热栖热菌核糖体蛋白L1的片段通过有限的胰蛋白酶消化和自发蛋白水解获得。研究了完整的L1及其蛋白水解片段与23S核糖体RNA的结合。前八个N端氨基酸对RNA结合很重要,因为缺少这些氨基酸的蛋白L1与23S rRNA的结合能力降低。多肽链在第36和37位残基之间的进一步切割完全消除了RNA结合。将这些数据与最近确定的嗜热栖热菌蛋白L1的结构进行比较,揭示了决定蛋白L1与23S rRNA特异性和强结合的相互作用的本质。

相似文献

1
[RNA-binding properties of ribosomal protein L1 from Thermus thermophilus].嗜热栖热菌核糖体蛋白L1的RNA结合特性
Biokhimiia. 1996 Nov;61(11):2040-4.
2
New insights into the interaction of ribosomal protein L1 with RNA.核糖体蛋白L1与RNA相互作用的新见解。
J Mol Biol. 2006 Jan 27;355(4):747-59. doi: 10.1016/j.jmb.2005.10.084. Epub 2005 Nov 17.
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Domain II of Thermus thermophilus ribosomal protein L1 hinders recognition of its mRNA.嗜热栖热菌核糖体蛋白L1的结构域II阻碍其对mRNA的识别。
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Crystal structure of ribosomal protein S8 from Thermus thermophilus reveals a high degree of structural conservation of a specific RNA binding site.嗜热栖热菌核糖体蛋白S8的晶体结构揭示了特定RNA结合位点的高度结构保守性。
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RNA-binding properties of an unusual ribosomal protein TL5 from Thermus thermophilus.嗜热栖热菌中一种不寻常的核糖体蛋白TL5的RNA结合特性
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Structure of the ribosomal protein L1-mRNA complex at 2.1 A resolution: common features of crystal packing of L1-RNA complexes.核糖体蛋白L1与mRNA复合物在2.1埃分辨率下的结构:L1-RNA复合物晶体堆积的共同特征
Acta Crystallogr D Biol Crystallogr. 2006 Dec;62(Pt 12):1545-54. doi: 10.1107/S0907444906041655. Epub 2006 Nov 23.
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Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16 S RNA.嗜热栖热菌30 S核糖体亚基的晶体结构:蛋白质结构及其与16 S RNA的相互作用
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The 16S rRNA binding site of Thermus thermophilus ribosomal protein S15: comparison with Escherichia coli S15, minimum site and structure.嗜热栖热菌核糖体蛋白S15的16S rRNA结合位点:与大肠杆菌S15的比较、最小位点及结构
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[The Thermus thermophilus 5S rRNA-protein complex: Identifications of specific binding sites for proteins L5 and L18 in 5S rRNA].嗜热栖热菌5S核糖体RNA-蛋白质复合物:5S核糖体RNA中蛋白质L5和L18特异性结合位点的鉴定
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Disruption of shape complementarity in the ribosomal protein L1-RNA contact region does not hinder specific recognition of the RNA target site.核糖体蛋白 L1-RNA 接触区域的构象互补性破坏并不妨碍对 RNA 靶位的特异性识别。
J Mol Recognit. 2011 Jul-Aug;24(4):524-32. doi: 10.1002/jmr.1063. Epub 2010 Aug 25.

引用本文的文献

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Studying the properties of domain I of the ribosomal protein l1: incorporation into ribosome and regulation of the l1 operon expression.研究核糖体蛋白L1结构域I的特性:掺入核糖体及L1操纵子表达的调控
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