• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种RNA病毒中的新型3'末端修复机制。

A novel 3'-end repair mechanism in an RNA virus.

作者信息

Nagy P D, Carpenter C D, Simon A E

机构信息

Department of Biochemistry and Molecular Biology, University of Massachusetts, Amherst 01003, USA.

出版信息

Proc Natl Acad Sci U S A. 1997 Feb 18;94(4):1113-8. doi: 10.1073/pnas.94.4.1113.

DOI:10.1073/pnas.94.4.1113
PMID:9037015
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC19753/
Abstract

Many positive-stranded RNA viruses contain short, single-stranded 3' ends that are vulnerable to degradation by host cellular RNases. Therefore, the existence of a 3'-end repair mechanism (analogous to cellular telomerases) must be required and/or advantageous for RNA viruses. Accordingly, we provide evidence suggesting that deletions of up to 6 nt from the 3' end of satellite (sat-) RNA C (a small parasitic RNA associated with turnip crinkle carmovirus) are repaired to the wild-type sequence in vivo and in vitro. The novel 3'-end repair mechanism involves the production of 4-8 nt oligoribonucleotides by abortive synthesis by the viral replicase using the 3' end of the viral genomic RNA as template. Based on our in vitro results, we postulate that the oligoribonucleotides are able to prime synthesis of wild-type negative-strand sat-RNA C in a reaction that does not require base pairing of the oligoribonucleotides to the mutant, positive-strand RNA template. The discovery of a 3'-end repair mechanism opens up new strategies for interfering with viral infections.

摘要

许多正链RNA病毒含有短的单链3'末端,这些末端容易被宿主细胞核糖核酸酶降解。因此,对于RNA病毒来说,3'末端修复机制(类似于细胞端粒酶)的存在必定是必需的和/或有益的。相应地,我们提供的证据表明,卫星(sat-)RNA C(一种与芜菁皱缩病毒相关的小寄生RNA)3'末端多达6个核苷酸的缺失在体内和体外都能修复为野生型序列。这种新的3'末端修复机制涉及病毒复制酶以病毒基因组RNA的3'末端为模板通过流产合成产生4 - 8个核苷酸的寡核糖核苷酸。基于我们的体外实验结果,我们推测这些寡核糖核苷酸能够在一个不需要寡核糖核苷酸与突变的正链RNA模板进行碱基配对的反应中引发野生型负链sat-RNA C的合成。3'末端修复机制的发现为干扰病毒感染开辟了新的策略。

相似文献

1
A novel 3'-end repair mechanism in an RNA virus.一种RNA病毒中的新型3'末端修复机制。
Proc Natl Acad Sci U S A. 1997 Feb 18;94(4):1113-8. doi: 10.1073/pnas.94.4.1113.
2
In vivo repair of 3'-end deletions in a TCV satellite RNA may involve two abortive synthesis and priming events.芜菁黄花叶病毒卫星RNA 3'-末端缺失的体内修复可能涉及两个无效合成和引发事件。
Virology. 1996 Dec 15;226(2):153-60. doi: 10.1006/viro.1996.0641.
3
Analysis in vivo of turnip crinkle virus satellite RNA C variants with mutations in the 3'-terminal minus-strand promoter.对在3'-末端负链启动子处发生突变的芜菁皱缩病毒卫星RNA C变体进行体内分析。
Virology. 1997 Nov 24;238(2):470-7. doi: 10.1006/viro.1997.8850.
4
RNA promoters located on (-)-strands of a subviral RNA associated with turnip crinkle virus.与芜菁皱缩病毒相关的亚病毒RNA负链上的RNA启动子。
RNA. 1997 Dec;3(12):1401-12.
5
In vitro characterization of late steps of RNA recombination in turnip crinkle virus.II. The role of the priming stem and flanking sequences.芜菁皱缩病毒RNA重组后期步骤的体外特性研究。II. 引发茎和侧翼序列的作用。
Virology. 1998 Sep 30;249(2):393-405. doi: 10.1006/viro.1998.9342.
6
Analysis of cis-acting sequences involved in plus-strand synthesis of a turnip crinkle virus-associated satellite RNA identifies a new carmovirus replication element.参与芜菁皱缩病毒相关卫星RNA正链合成的顺式作用序列分析鉴定出一种新的 Carmovirus 复制元件。
Virology. 2000 Mar 15;268(2):345-54. doi: 10.1006/viro.1999.0153.
7
Polymerization of nontemplate bases before transcription initiation at the 3' ends of templates by an RNA-dependent RNA polymerase: an activity involved in 3' end repair of viral RNAs.模板3'端转录起始前非模板碱基通过RNA依赖的RNA聚合酶进行的聚合作用:一种参与病毒RNA 3'端修复的活性。
Proc Natl Acad Sci U S A. 2000 Nov 7;97(23):12451-6. doi: 10.1073/pnas.97.23.12451.
8
In vivo and in vitro characterization of an RNA replication enhancer in a satellite RNA associated with turnip crinkle virus.与芜菁皱缩病毒相关的卫星RNA中RNA复制增强子的体内和体外特性分析
Virology. 2001 Sep 30;288(2):315-24. doi: 10.1006/viro.2001.1099.
9
Analysis of sequences and predicted structures required for viral satellite RNA accumulation by in vivo genetic selection.通过体内遗传选择分析病毒卫星RNA积累所需的序列和预测结构。
Nucleic Acids Res. 1998 May 15;26(10):2426-32. doi: 10.1093/nar/26.10.2426.
10
RNA elements required for RNA recombination function as replication enhancers in vitro and in vivo in a plus-strand RNA virus.RNA重组所需的RNA元件在正链RNA病毒的体外和体内作为复制增强子发挥作用。
EMBO J. 1999 Oct 15;18(20):5653-65. doi: 10.1093/emboj/18.20.5653.

引用本文的文献

1
Synergistic correlation between host angiogenin and dengue virus replication.宿主血管生成素与登革病毒复制的协同相关性。
RNA Biol. 2023 Jan;20(1):805-816. doi: 10.1080/15476286.2023.2264003. Epub 2023 Oct 5.
2
Mutation Rates, Mutation Frequencies, and Proofreading-Repair Activities in RNA Virus Genetics.RNA 病毒遗传学中的突变率、突变频率和校对修复活性。
Viruses. 2021 Sep 21;13(9):1882. doi: 10.3390/v13091882.
3
A single mutation in the -acting replication element identified within the EV-A71 2C-coding region causes defects in virus production in cell culture.在肠道病毒 A71(EV-A71)2C 编码区中发现的 - 作用复制元件中的单个突变导致病毒在细胞培养中产生缺陷。
Emerg Microbes Infect. 2021 Dec;10(1):1988-1999. doi: 10.1080/22221751.2021.1977590.
4
Replication-Dependent Biogenesis of Turnip Crinkle Virus Long Noncoding RNAs.芜菁皱缩病毒长非编码 RNA 的复制依赖性生物发生。
J Virol. 2021 Aug 25;95(18):e0016921. doi: 10.1128/JVI.00169-21.
5
Gamma irradiation-mediated inactivation of enveloped viruses with conservation of genome integrity: Potential application for SARS-CoV-2 inactivated vaccine development.γ射线辐照介导的包膜病毒灭活与基因组完整性的保留:在严重急性呼吸综合征冠状病毒2(SARS-CoV-2)灭活疫苗开发中的潜在应用
Open Life Sci. 2021 Jun 2;16(1):558-570. doi: 10.1515/biol-2021-0051. eCollection 2021.
6
Viral quasispecies.病毒准种。
PLoS Genet. 2019 Oct 17;15(10):e1008271. doi: 10.1371/journal.pgen.1008271. eCollection 2019 Oct.
7
Emergency Services of Viral RNAs: Repair and Remodeling.病毒 RNA 的应急服务:修复与重塑。
Microbiol Mol Biol Rev. 2018 Mar 14;82(2). doi: 10.1128/MMBR.00067-17. Print 2018 Jun.
8
Cystoviral RNA-directed RNA polymerases: Regulation of RNA synthesis on multiple time and length scales.囊状病毒RNA指导的RNA聚合酶:在多个时间和长度尺度上对RNA合成的调控
Virus Res. 2017 Apr 15;234:135-152. doi: 10.1016/j.virusres.2017.01.006. Epub 2017 Jan 16.
9
Mutagenic Effects of Ribavirin on Hepatitis E Virus-Viral Extinction versus Selection of Fitness-Enhancing Mutations.利巴韦林对戊型肝炎病毒的诱变作用——病毒灭绝与适应性增强突变的选择
Viruses. 2016 Oct 13;8(10):283. doi: 10.3390/v8100283.
10
Coordinated function of cellular DEAD-box helicases in suppression of viral RNA recombination and maintenance of viral genome integrity.细胞DEAD盒解旋酶在抑制病毒RNA重组和维持病毒基因组完整性中的协同作用。
PLoS Pathog. 2015 Feb 18;11(2):e1004680. doi: 10.1371/journal.ppat.1004680. eCollection 2015 Feb.

本文引用的文献

1
Immunocytochemical localization of TYMV-coded structural and nonstructural proteins by the protein A-gold technique.采用蛋白A-金技术对芜菁黄花叶病毒编码的结构蛋白和非结构蛋白进行免疫细胞化学定位。
Virology. 1986 May;151(1):100-9. doi: 10.1016/0042-6822(86)90107-8.
2
The virulent satellite RNA of turnip crinkle virus has a major domain homologous to the 3' end of the helper virus genome.芜菁花叶病毒的强毒卫星 RNA 有一个主要结构域与辅助病毒基因组的 3' 末端同源。
EMBO J. 1986 Dec 20;5(13):3423-8. doi: 10.1002/j.1460-2075.1986.tb04664.x.
3
In vivo repair of 3'-end deletions in a TCV satellite RNA may involve two abortive synthesis and priming events.芜菁黄花叶病毒卫星RNA 3'-末端缺失的体内修复可能涉及两个无效合成和引发事件。
Virology. 1996 Dec 15;226(2):153-60. doi: 10.1006/viro.1996.0641.
4
Open reading frames of turnip crinkle virus involved in satellite symptom expression and incompatibility with Arabidopsis thaliana ecotype Dijon.芜菁皱缩病毒的开放阅读框与卫星症状表达及与拟南芥第戎生态型的不亲和性有关。
Mol Plant Microbe Interact. 1995 Nov-Dec;8(6):979-87. doi: 10.1094/mpmi-8-0979.
5
In vivo restoration of biologically active 3' ends of virus-associated RNAs by nonhomologous RNA recombination and replacement of a terminal motif.通过非同源RNA重组和末端基序替换在体内恢复病毒相关RNA的生物活性3'末端
J Virol. 1996 Jan;70(1):478-86. doi: 10.1128/JVI.70.1.478-486.1996.
6
Repair in vivo of altered 3' terminus of cymbidium ringspot tombusvirus RNA.大花蕙兰环斑番茄病毒RNA改变的3'末端的体内修复
Virology. 1993 Feb;192(2):551-5. doi: 10.1006/viro.1993.1071.
7
Biochemical and genetic evidence for a pseudoknot structure at the 3' terminus of the poliovirus RNA genome and its role in viral RNA amplification.脊髓灰质炎病毒RNA基因组3'末端假结结构的生化和遗传学证据及其在病毒RNA扩增中的作用。
J Virol. 1993 Jun;67(6):2961-71. doi: 10.1128/JVI.67.6.2961-2971.1993.
8
RNA-dependent RNA polymerase from plants infected with turnip crinkle virus can transcribe (+)- and (-)-strands of virus-associated RNAs.感染芜菁皱缩病毒的植物中的RNA依赖性RNA聚合酶能够转录病毒相关RNA的正链和负链。
Proc Natl Acad Sci U S A. 1994 Sep 13;91(19):8792-6. doi: 10.1073/pnas.91.19.8792.
9
Unusual heterogeneity of leader-mRNA fusion in a murine coronavirus: implications for the mechanism of RNA transcription and recombination.小鼠冠状病毒中前导mRNA融合的异常异质性:对RNA转录和重组机制的启示
J Virol. 1994 Oct;68(10):6626-33. doi: 10.1128/JVI.68.10.6626-6633.1994.
10
Identification of terminal adenylyl transferase activity of the poliovirus polymerase 3Dpol.脊髓灰质炎病毒聚合酶3Dpol末端腺苷酸转移酶活性的鉴定
J Virol. 1994 Sep;68(9):5811-8. doi: 10.1128/JVI.68.9.5811-5818.1994.