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Expression, purification from inclusion bodies, and crystal characterization of a transition state analog complex of arginine kinase: a model for studying phosphagen kinases.精氨酸激酶过渡态类似物复合物的表达、包涵体纯化及晶体表征:一种用于研究磷酸原激酶的模型
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2
Induced fit in guanidino kinases--comparison of substrate-free and transition state analog structures of arginine kinase.胍基激酶中的诱导契合——精氨酸激酶无底物结构与过渡态类似物结构的比较
Protein Sci. 2003 Jan;12(1):103-11. doi: 10.1110/ps.0226303.
3
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4
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Biochem J. 1999 Jun 15;340 ( Pt 3)(Pt 3):671-5.
8
Refinement of the arginine kinase transition-state analogue complex at 1.2 A resolution: mechanistic insights.精氨酸激酶过渡态类似物复合物在1.2埃分辨率下的优化:机理洞察
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Purification and characterization of arginine kinase from locust.蝗虫精氨酸激酶的纯化与鉴定
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Evolution of phosphagen kinase. Isolation, characterization and cDNA-derived amino acid sequence of two-domain arginine kinase from the sea anemone Anthopleura japonicus.磷酸原激酶的进化。日本海葵刺胞海葵两结构域精氨酸激酶的分离、表征及cDNA推导的氨基酸序列
Biochem J. 1997 Nov 15;328 ( Pt 1)(Pt 1):301-6. doi: 10.1042/bj3280301.

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The Sampling of Conformational Dynamics in Ambient-Temperature Crystal Structures of Arginine Kinase.精氨酸激酶常温晶体结构中构象动力学的采样
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A DNA vaccine targeting p42.3 induces protective antitumor immunity via eliciting cytotoxic CD8+T lymphocytes in a murine melanoma model.一种针对 p42.3 的 DNA 疫苗通过在小鼠黑色素瘤模型中诱导细胞毒性 CD8+T 淋巴细胞,引发保护性抗肿瘤免疫。
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3
Crystal structures of arginine kinase in complex with ADP, nitrate, and various phosphagen analogs.精氨酸激酶与 ADP、硝酸盐和各种磷酸原类似物复合物的晶体结构。
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4
Induced fit in guanidino kinases--comparison of substrate-free and transition state analog structures of arginine kinase.胍基激酶中的诱导契合——精氨酸激酶无底物结构与过渡态类似物结构的比较
Protein Sci. 2003 Jan;12(1):103-11. doi: 10.1110/ps.0226303.
5
Functional aspects of the X-ray structure of mitochondrial creatine kinase: a molecular physiology approach.线粒体肌酸激酶X射线结构的功能方面:一种分子生理学方法。
Mol Cell Biochem. 1998 Jul;184(1-2):125-40.
6
Transition state structure of arginine kinase: implications for catalysis of bimolecular reactions.精氨酸激酶的过渡态结构:对双分子反应催化作用的启示
Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):8449-54. doi: 10.1073/pnas.95.15.8449.

本文引用的文献

1
Predispensed gradient matrices - a new rapid method of finding crystallization conditions.预分配梯度矩阵——一种寻找结晶条件的新快速方法。
Acta Crystallogr D Biol Crystallogr. 1994 Jul 1;50(Pt 4):441-2. doi: 10.1107/S0907444993014386.
2
Expression of horseshoe crab arginine kinase in Escherichia coli and site-directed mutations of the reactive cysteine peptide.鲎精氨酸激酶在大肠杆菌中的表达及活性半胱氨酸肽的定点突变
Comp Biochem Physiol B Biochem Mol Biol. 1996 Apr;113(4):809-16. doi: 10.1016/0305-0491(95)02104-3.
3
Structure of mitochondrial creatine kinase.线粒体肌酸激酶的结构
Nature. 1996 May 23;381(6580):341-5. doi: 10.1038/381341a0.
4
Denaturation and urea gradient gel electrophoresis of arginine kinase: evidence for a collapsed-state conformation.精氨酸激酶的变性与尿素梯度凝胶电泳:关于折叠态构象的证据
Arch Biochem Biophys. 1996 Feb 1;326(1):93-9. doi: 10.1006/abbi.1996.0051.
5
Cloning and sequence analysis of the cDNA for arginine kinase of lobster muscle.龙虾肌肉精氨酸激酶cDNA的克隆与序列分析
J Biol Chem. 1993 Oct 15;268(29):21599-605.
6
Evolution of phosphagen kinase. Primary structure of glycocyamine kinase and arginine kinase from invertebrates.磷酸原激酶的进化。来自无脊椎动物的胍基乙胺激酶和精氨酸激酶的一级结构。
J Mol Biol. 1994 Apr 1;237(3):353-7. doi: 10.1006/jmbi.1994.1237.
7
The tryptophan residues of mitochondrial creatine kinase: roles of Trp-223, Trp-206, and Trp-264 in active-site and quaternary structure formation.线粒体肌酸激酶的色氨酸残基:Trp-223、Trp-206和Trp-264在活性位点和四级结构形成中的作用。
Protein Sci. 1994 Jul;3(7):1058-68. doi: 10.1002/pro.5560030708.
8
Control of nucleation of protein crystals.蛋白质晶体成核的控制。
Protein Sci. 1994 Oct;3(10):1638-43. doi: 10.1002/pro.5560031003.
9
Isolation and sequence analysis of the gene for arginine kinase from the chelicerate arthropod, Limulus polyphemus: insights into catalytically important residues.从螯肢类节肢动物美洲鲎中分离精氨酸激酶基因并进行序列分析:对催化重要残基的见解。
Biochim Biophys Acta. 1995 Jan 19;1246(2):197-200. doi: 10.1016/0167-4838(94)00218-6.
10
Sequence homology and structure predictions of the creatine kinase isoenzymes.肌酸激酶同工酶的序列同源性和结构预测
Mol Cell Biochem. 1994 Apr-May;133-134:245-62. doi: 10.1007/BF01267958.

精氨酸激酶过渡态类似物复合物的表达、包涵体纯化及晶体表征:一种用于研究磷酸原激酶的模型

Expression, purification from inclusion bodies, and crystal characterization of a transition state analog complex of arginine kinase: a model for studying phosphagen kinases.

作者信息

Zhou G, Parthasarathy G, Somasundaram T, Ables A, Roy L, Strong S J, Ellington W R, Chapman M S

机构信息

Department of Chemistry, Florida State University, Tallahassee 32306-3015, USA.

出版信息

Protein Sci. 1997 Feb;6(2):444-9. doi: 10.1002/pro.5560060222.

DOI:10.1002/pro.5560060222
PMID:9041648
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2143656/
Abstract

Phosphagen kinases catalyze the reversible transfer of a phosphoryl group between guanidino phosphate compounds and ADP, thereby regenerating ATP during bursts of cellular activity. Large quantities of highly pure arginine kinase (EC 2.7.3.3), the phosphagen kinase present in arthropods, have been isolated from E. coli, into which the cDNA for the horseshoe crab enzyme had been cloned. Purification involves size exclusion and anion exchange chromatographies applied in the denatured and refolded states. The recombinant enzyme has been crystallized as a transition state analog complex. Near complete native diffraction data have been collected to 1.86 A resolution. Substitution of a recombinant source for a natural one, improvement in the purification, and data collection at cryo temperatures have all yielded significant improvements in diffraction.

摘要

磷酸原激酶催化胍基磷酸化合物与ADP之间磷酸基团的可逆转移,从而在细胞活动爆发期间再生ATP。大量高纯度的精氨酸激酶(EC 2.7.3.3),即节肢动物中存在的磷酸原激酶,已从大肠杆菌中分离出来,其中已克隆了鲎酶的cDNA。纯化涉及在变性和复性状态下应用的尺寸排阻色谱和阴离子交换色谱。重组酶已结晶为过渡态类似物复合物。已收集到分辨率为1.86 Å的近乎完整的天然衍射数据。用重组来源替代天然来源、改进纯化方法以及在低温下进行数据收集,都在衍射方面取得了显著改进。