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通过重组PCR诱变进行表位作图与标记

Epitope mapping and tagging by recombination PCR mutagenesis.

作者信息

Hatfield C, Duus K M, Chen J, Jones D H, Grose C

机构信息

University of Iowa College of Medicine, Iowa City, USA.

出版信息

Biotechniques. 1997 Feb;22(2):332-7. doi: 10.2144/97222rr02.

DOI:10.2144/97222rr02
PMID:9043707
Abstract

We describe a rapid PCR method that directly inserts an epitope tag into an open reading frame (ORF) to facilitate protein detection. This project was performed within a varicella-zoster virus (VZV) system. In earlier work, we produced a monoclonal antibody (MAb 3B3) to one VZV ORF called gE. MAb 3B3 bound to its epitope under extreme denaturing conditions. To further characterize the epitope, we devised a technique that identified the epitope by its insertion into another protein of interest. The 3B3 epitope was mapped to 11 residues (residues 151-161; QRQYGDVFKGD) in the gE ectodomain by using the technique of recombination PCR. At the same time, the 3B3 epitope was inserted in-frame into another VZV protein for which no MAb was available. The end result, VZV gL3B3.11, was a unique construct possessing a 33-bp insertion that expresses gL-3B3 protein recognized by the MAb 3B3. The 3B3 epitope was verified to be both highly functional and stable. An important advantage of this recombination PCR method of epitope mapping and tagging is that the epitope sequence can be inserted anywhere along the nucleotide sequence of an ORF, regardless of existing restriction sites.

摘要

我们描述了一种快速聚合酶链反应(PCR)方法,该方法可将表位标签直接插入开放阅读框(ORF)以促进蛋白质检测。本项目是在水痘-带状疱疹病毒(VZV)系统中进行的。在早期工作中,我们针对一种名为gE的VZV ORF制备了单克隆抗体(MAb 3B3)。MAb 3B3在极端变性条件下与其表位结合。为了进一步表征该表位,我们设计了一种技术,通过将其插入另一种感兴趣的蛋白质中来鉴定表位。通过重组PCR技术,3B3表位被定位到gE胞外域的11个残基(残基151 - 161;QRQYGDVFKGD)上。同时,3B3表位被读框内插入到另一种没有可用MAb的VZV蛋白中。最终产物VZV gL3B3.11是一种独特的构建体,具有一个33 bp的插入片段,表达可被MAb 3B3识别的gL - 3B3蛋白。3B3表位被证实具有高度功能性和稳定性。这种用于表位定位和标记的重组PCR方法的一个重要优点是,表位序列可以沿着ORF的核苷酸序列插入到任何位置,而无需考虑现有的限制性酶切位点。

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引用本文的文献

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Egress of light particles among filopodia on the surface of Varicella-Zoster virus-infected cells.水痘带状疱疹病毒感染细胞表面丝状伪足间轻粒子的流出。
J Virol. 2008 Mar;82(6):2821-35. doi: 10.1128/JVI.01821-07. Epub 2008 Jan 9.
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Incorporation of three endocytosed varicella-zoster virus glycoproteins, gE, gH, and gB, into the virion envelope.
三种内吞的水痘带状疱疹病毒糖蛋白gE、gH和gB整合到病毒粒子包膜中。
J Virol. 2005 Jan;79(2):997-1007. doi: 10.1128/JVI.79.2.997-1007.2005.
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Regulation of varicella-zoster virus-induced cell-to-cell fusion by the endocytosis-competent glycoproteins gH and gE.具有内吞能力的糖蛋白gH和gE对水痘带状疱疹病毒诱导的细胞间融合的调控
J Virol. 2004 Mar;78(6):2884-96. doi: 10.1128/jvi.78.6.2884-2896.2004.
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A functional YNKI motif in the short cytoplasmic tail of varicella-zoster virus glycoprotein gH mediates clathrin-dependent and antibody-independent endocytosis.水痘带状疱疹病毒糖蛋白gH短细胞质尾中的功能性YNKI基序介导网格蛋白依赖性和抗体非依赖性内吞作用。
J Virol. 2003 Apr;77(7):4191-204. doi: 10.1128/jvi.77.7.4191-4204.2003.
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Phosphorylation by the varicella-zoster virus ORF47 protein serine kinase determines whether endocytosed viral gE traffics to the trans-Golgi network or recycles to the cell membrane.水痘带状疱疹病毒ORF47蛋白丝氨酸激酶的磷酸化作用决定了内吞的病毒糖蛋白E(gE)是转运至反式高尔基体网络还是循环至细胞膜。
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