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通过将扭曲的地理地图与空间种群聚类叠加来评估空间遗传多样性。应用于美洲原住民部落的GM单倍型。

Assessment of genetic diversity in space by superimposition of a distorted geographic map with a spatial population clustering. Application to GM haplotypes of native Amerindian tribes.

作者信息

Mourrieras B, Dugoujon J M, Buffat L, Hazout S

机构信息

Centre de Bioinformatique, INSERM U155, Université Denis Diderot, Paris, France.

出版信息

Ann Hum Genet. 1997 Jan;61(Pt 1):37-47. doi: 10.1046/j.1469-1809.1997.6110035.x.

DOI:10.1046/j.1469-1809.1997.6110035.x
PMID:9066926
Abstract

The GM immunoglobulin (Ig) allotype distributions of 49 native Amerindian populations from North to South America were analysed by a new technique called 'Mobile Sites Method' (MSM). This allows the global interpretation of genetic diversity in space by means of a distorted geographic map called a 'genetic similarity map'. This approach has been improved by superimposing in the distorted geographic map both the haplotype set (represented by hypothetical populations having a 100% frequency of the haplotype considered) and the 'geography-genetics discontinuities' (i.e. the zones between homogeneous population clusters). This bidimensional representation completes the interpretation of the genetic distances between populations in terms of local genetic diversity and possible migrations. Our results concerning the spatial distribution of the Amerindian populations show: (i) a great interdependence of the geographic locations and the GM haplotype distributions (the importance of the geographic factor was checked with the usual technique of 'random sampling' and the percentage of explained distance variability decreases from 78% with the observed data to a level less than 67% with the random data); (ii) a parallelism between genetics and linguistics groups as indicated by the population clusters in the similarity map, and (iii) a complex distorted map revealing the presence of multiple population migrations and admixtures in the course of time. A particular distortion of South America suggests possible migrations by sea along the western and eastern coasts of Central America, or multiple migration waves without population admixture across Central America.

摘要

运用一种名为“移动位点法”(MSM)的新技术,分析了从北美洲到南美洲的49个美洲印第安原住民群体的GM免疫球蛋白(Ig)同种异型分布情况。这使得通过一种被称为“遗传相似性地图”的变形地理地图,对空间中的遗传多样性进行整体解读成为可能。通过在变形地理地图上叠加单倍型集(由所考虑单倍型频率为100%的假设群体表示)和“地理 - 遗传间断”(即同质群体簇之间的区域),这种方法得到了改进。这种二维表示法从局部遗传多样性和可能的迁移角度,完善了对群体间遗传距离的解读。我们关于美洲印第安人群体空间分布的研究结果表明:(i)地理位置与GM单倍型分布之间存在高度的相互依存关系(通过“随机抽样”的常用技术检验了地理因素的重要性,所解释的距离变异性百分比从观测数据的78%降至随机数据的低于67%);(ii)相似性地图中的群体簇表明遗传学群体和语言学群体之间存在平行关系;(iii)一幅复杂的变形地图揭示了随着时间推移存在多次群体迁移和混合现象。南美洲的一种特殊变形表明,可能存在沿着中美洲西海岸和东海岸的海上迁移,或者是没有群体混合的多次跨中美洲迁移浪潮。

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Assessment of genetic diversity in space by superimposition of a distorted geographic map with a spatial population clustering. Application to GM haplotypes of native Amerindian tribes.通过将扭曲的地理地图与空间种群聚类叠加来评估空间遗传多样性。应用于美洲原住民部落的GM单倍型。
Ann Hum Genet. 1997 Jan;61(Pt 1):37-47. doi: 10.1046/j.1469-1809.1997.6110035.x.
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