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阿根廷囊性纤维化患者中CFTR基因突变谱

Spectrum of CFTR mutations in Argentine cystic fibrosis patients.

作者信息

Chertkoff L, Visich A, Bienvenu T, Grenoville M, Segal E, Carniglia L, Kaplan J C, Barreiro C

机构信息

Laboratorio de Biología Molecular, Hospital de Pediatría Juan P. Garrahan, Buenos Aires, Argentina.

出版信息

Clin Genet. 1997 Jan;51(1):43-7. doi: 10.1111/j.1399-0004.1997.tb02413.x.

Abstract

The identification of different mutations which cause cystic fibrosis (CF) in Argentine patients has been performed. Initially, 10 of the most commonly mutated loci in 228 independent chromosomes were analyzed. Each allele was detected by PCR amplification of DNA samples either directly on polyacrylamide gels, by restriction enzyme digestion and agarose gels electrophoresis, or by hybridization with allele specific oligonucleotides. The delta F508 mutation was found in 57% of the alleles. The frequencies of the other CF mutations were as follows: G542X 3.9%, W1282X 3.1%, N1303K 1.7%, 1717 1-G-->A 0.9%, R553X 0.4%, R1162X 0.4%, whereas G551D, delta I507 and S549N were not found. This direct mutation analysis enabled the detection of 155/228 CF alleles (67%). Of the remaining 73 unidentified CF alleles, 22 were investigated for the 27 exons by DGGE and 9 rare mutations were identified. The incidence of the main CF mutations analyzed was similar to that of the South European population and markedly different from other Latin American countries. The mutation data presented here may be useful for designing DNA testing strategies for CF in Argentina.

摘要

已对导致阿根廷患者囊性纤维化(CF)的不同突变进行了鉴定。最初,对228条独立染色体中10个最常见的突变位点进行了分析。通过对DNA样本进行PCR扩增,然后直接在聚丙烯酰胺凝胶上、通过限制性内切酶消化和琼脂糖凝胶电泳或与等位基因特异性寡核苷酸杂交来检测每个等位基因。在57%的等位基因中发现了ΔF508突变。其他CF突变的频率如下:G542X为3.9%,W1282X为3.1%,N1303K为1.7%,1717 1-G→A为0.9%,R553X为0.4%,R1162X为0.4%,而未发现G551D、ΔI507和S549N。这种直接突变分析能够检测出228个CF等位基因中的155个(67%)。在其余73个未鉴定的CF等位基因中,通过变性梯度凝胶电泳(DGGE)对27个外显子进行了研究,并鉴定出9个罕见突变。所分析的主要CF突变的发生率与南欧人群相似,与其他拉丁美洲国家明显不同。这里呈现的突变数据可能有助于设计阿根廷CF的DNA检测策略。

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